Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq29 134 1e-26 seq158 122 7e-23 seq32 93.3 3e-14 >seq29 Length=315494 Score = 134 bits (148), Expect = 1e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 101278 TTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAA 101337 ||| ||||| ||||||||||| | | |||||| | || ||||| ||||| |||||||| Sbjct 102489 TTCCTTTTGAATATTGTAATCCGAAAGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAA 102548 Query 101338 TATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAAT 101397 ||||| || |||||||| || |||||||| || || || ||||| ||| ||| ||| | Sbjct 102549 AATCAATCGTTGTTGATCAGGTGGAATGCCCTCCTTGTCCTGAATCTTTGATTTAACATT 102608 Query 101398 TTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTAC 101457 || | || || |||| ||||||||| | || | || || || ||||| || || || Sbjct 102609 ATCAATGGTATCTGACGATTCCACTTCTAATGTAATTGTCTTACCAGTTAAGGTCTTGAC 102668 Query 101458 AAATATCTGCAT 101469 ||| || ||||| Sbjct 102669 AAAGATTTGCAT 102680 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 ||||| ||||||||||| || || || |||||||| |||| | || | |||| || Sbjct 102928 ACTAAGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCGGAAAGGGTGCGACCATCTTCA 102987 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||| || || || || |||||||| ||||||||||| || |||||||| ||||||||| Sbjct 102988 AGTTGTTTGCCAGCGAAGATCAAACGTTGTTGATCGGGAGGGATGCCTTCCTTATCTTGA 103047 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || ||| || | || | ||||| || | ||| ||||| ||||||| || || Sbjct 103048 ATCTTCGATTTAACGTTGTCGATGGTGTCTGAAGATTCGACTTCGAGAGTGATGGTCTTT 103107 Query 101441 CCGGTTAAAGTTTTTACAAATAT 101463 ||||| | || || || | ||| Sbjct 103108 CCGGTAAGGGTCTTAACGACTAT 103130 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || ||||| | || ||||| ||||| || |||||||| | | || | |||| || Sbjct 102700 ACCAAATGTAAAGTCGATTCCTTTTGAATGTTGTAATCCGAAAGTGTACGTCCATCCTCA 102759 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||||||| ||||| || | ||| ||||||||||| || || || || |||||||| Sbjct 102760 AGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTGGGATACCCTCCTTATCTTGG 102819 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || ||| |||||| | || | |||||| || | ||| || || || |||| ||| || Sbjct 102820 ATCTTTGACTTTACATTATCGATAGTGTCCGATGATTCAACCTCCAGGGTGATCGTCTTT 102879 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| | || || || || |||||||| Sbjct 102880 CCGGTAAGTGTCTTGACGAAAATCTGCAT 102908 >seq158 Length=74113 Score = 122 bits (134), Expect = 7e-23 Identities = 157/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 |||||| || || ||||| ||||| || ||||| || |||||||||| | || | | Sbjct 63141 ACGTAACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACC 63200 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | |||||| || || || ||||| |||||||||||||| ||||| || || || Sbjct 63201 ATCTTCTAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGATCGGGTGGAATTCCCTCCTT 63260 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 || || || || || ||| | || | ||||| || | || || || || |||| Sbjct 63261 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGAT 63320 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 |||||||| || | || || || || ||||||||| Sbjct 63321 GGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 63357 >seq32 Length=306211 Score = 93.3 bits (102), Expect = 3e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 101282 TTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATC 101341 ||||| || |||||||| | || ||| | | || ||||||||||| || || || ||| Sbjct 242386 TTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCCTCCAATTGCTTTCCAGCGAAGATC 242327 Query 101342 AAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCT 101401 ||||| ||||||||||| ||||| || || || || || || || || ||| | || Sbjct 242326 AAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 242267 Query 101402 ACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 | ||||| || | || || ||||| |||| || ||||| || Sbjct 242266 ATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 242223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396270561489411