Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq7 132 9e-26 seq81 100 5e-16 >seq7 Length=635569 Score = 132 bits (146), Expect = 9e-26 Identities = 334/511 (65%), Gaps = 7/511 (1%) Strand=Plus/Plus Query 25814 GCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGAT-CAACAGCCAGAGCGCTACGTTT 25872 |||| |||| |||||| ||||| | || ||||| ||| | ||| | | || ||| Sbjct 461822 GCATTAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGATA-AGAACTCCACCTTT 461880 Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 | | || || || || || ||||| || || || || || ||| ||| || || || Sbjct 461881 GCTCAACGTCTTGTCGCATTCGCTGCCGTTGAAGGTATTTTCTTCTCCGGATCCTTCGCA 461940 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992 | ||||||||||||||| || || |||| |||| || ||| |||||||| ||| Sbjct 461941 TCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGGCCGGACTCACCTTCTCCAACGAACTC 462000 Query 25993 ATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTG 26052 ||| | | ||||| |||||||||| ||||| || ||||| |||| | | ||| | Sbjct 462001 ATCTCCCGTGACGAAGGTCTCCACACCGATTTCGCATGCCTCCTCTTCTC---CCATCTC 462057 Query 26053 CTCCACAAACCTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGA 26111 ||| || || |||| | |||| | |||||| || || || || ||||| Sbjct 462058 AAGCACCGCCCATC-CAAGCAAGCCGTTCAAGACGTCATCACCGAAGCCGTCGAAATCGA 462116 Query 26112 GAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCAT 26171 | | || || ||||||||||| | ||||| Sbjct 462117 GCAAGAATTCTTGACCGAGGCTCTTCCTTGTGCTCTTTTGGGCATGAACTCTACCCTCAT 462176 Query 26172 GAGCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACT 26231 || ||||||||||| | ||| || || | ||| || | |||| || || | | Sbjct 462177 GAAGCAATACATTGAATTTGTTGCTGATCGTCTCCTCATCGCTTTGGGTAACGACAAAGT 462236 Query 26232 CTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAA 26291 |||| | | ||||| |||||||| ||||||||||| || |||| || |||||||| Sbjct 462237 TTACAAATCTGCCAACCCATTCGACTTCATGGAAAACATCTCCTTGGCCGGCAAGACCAA 462296 Query 26292 CTTCTTTGAAAAGAGGGTCGGCGACTATCAA 26322 |||||| |||||||| || || || || ||| Sbjct 462297 CTTCTTCGAAAAGAGAGTTGGTGATTACCAA 462327 >seq81 Length=155533 Score = 100 bits (110), Expect = 5e-16 Identities = 385/593 (65%), Gaps = 20/593 (3%) Strand=Plus/Plus Query 221942 GTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGA 222001 ||| ||||| | | |||| || || || | || ||| |||||||| | ||| Sbjct 111719 GTAGAGAGCCT--CGAACTCCTCGCCATAAACATCTGCCAAACCTGGACATTCGTTGGGG 111776 Query 222002 CACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCAC 222061 ||||| ||| |||| | | || | || || | || |||||| || || || |||||| Sbjct 111777 CACATGAGAGTCCAATCCCCATTCTTTTCAACACGCTTCATGAATAGATCAGGAATCCAC 111836 Query 222062 AGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCC 222121 | || | |||||||| | | || || ||| || | || || | ||||| Sbjct 111837 AAGGCGTAGAAGAGATCGCGTGCACGAACTTCTTCCTTACCATGATTCTTGCGTAGATCA 111896 Query 222122 AAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGC 222181 | ||||| |||| || || ||||| || ||||| || || || | || || || ||| Sbjct 111897 AGGAACTCGAAAACATCCGCATGCCATGGTTCCAGGTAAACAGCAAAGGCACCAGGACGC 111956 Query 222182 TTGTTGCCACCCTGATCCACCATCCTCTC-CAGAGC-GTTGAAGATGCGAAGGGTCGGTA 222239 ||||| ||||| ||||| || || ||| ||| | |||||| | || || | || | Sbjct 111957 TTGTTACCACCTTGATCAAC-ATA-TCTGGCAGTGTTGTTGAAAACTCGGAGCATAGGAA 112014 Query 222240 CCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC 222299 | | |||||||| || ||||| || |||||| ||||| ||| | || | | Sbjct 112015 CAATACCGTTGGAATTTCCATTGGTACCGGCAATGTATGCACCAGTGGCAC---GGATTC 112071 Query 222300 TGGCAGACATG---CCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAG 222356 || | || || ||||||||||| | || |||||||| || || |||| | || Sbjct 112072 TGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATAGCACAAATCTTCAAAG 112131 Query 222357 TGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCT 222416 | || || || || ||| ||||||||| | || | || || || || || | | Sbjct 112132 TATCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATAAGGAAGCATGATGAAAGTT 112191 Query 222417 GAGATTTGGTGGA--ACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCT 222474 | | || ||||| || ||| || || || || || ||||| ||||| | Sbjct 112192 GTGCTT--GTGGAGTACCCGCGGAGAAGAGTGTTGGCGAAGCATGTGTGAAGTACTTGTT 112249 Query 222475 AGACATCAGATCGTACGTCTC--TACGACTCTGGCGATGTTGTCCCCGTGAAT 222525 ||||||| || ||| || || || ||||| |||| | || |||||||| Sbjct 112250 TGACATCAAATTGTATGTTTCGATAGCACTCT--CGATATCATCACCGTGAAT 112300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928825956061120