Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017-
05-31] 1,623 sequences; 40,749,071 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq7 132 9e-26
seq81 100 5e-16
>seq7
Length=635569
Score = 132 bits (146), Expect = 9e-26
Identities = 334/511 (65%), Gaps = 7/511 (1%)
Strand=Plus/Plus
Query 25814 GCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGAT-CAACAGCCAGAGCGCTACGTTT 25872
|||| |||| |||||| ||||| | || ||||| ||| | ||| | | || |||
Sbjct 461822 GCATTAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGATA-AGAACTCCACCTTT 461880
Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932
| | || || || || || ||||| || || || || || ||| ||| || || ||
Sbjct 461881 GCTCAACGTCTTGTCGCATTCGCTGCCGTTGAAGGTATTTTCTTCTCCGGATCCTTCGCA 461940
Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992
| ||||||||||||||| || || |||| |||| || ||| |||||||| |||
Sbjct 461941 TCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGGCCGGACTCACCTTCTCCAACGAACTC 462000
Query 25993 ATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTG 26052
||| | | ||||| |||||||||| ||||| || ||||| |||| | | ||| |
Sbjct 462001 ATCTCCCGTGACGAAGGTCTCCACACCGATTTCGCATGCCTCCTCTTCTC---CCATCTC 462057
Query 26053 CTCCACAAACCTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGA 26111
||| || || |||| | |||| | |||||| || || || || |||||
Sbjct 462058 AAGCACCGCCCATC-CAAGCAAGCCGTTCAAGACGTCATCACCGAAGCCGTCGAAATCGA 462116
Query 26112 GAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCAT 26171
| | || || ||||||||||| | |||||
Sbjct 462117 GCAAGAATTCTTGACCGAGGCTCTTCCTTGTGCTCTTTTGGGCATGAACTCTACCCTCAT 462176
Query 26172 GAGCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACT 26231
|| ||||||||||| | ||| || || | ||| || | |||| || || | |
Sbjct 462177 GAAGCAATACATTGAATTTGTTGCTGATCGTCTCCTCATCGCTTTGGGTAACGACAAAGT 462236
Query 26232 CTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAA 26291
|||| | | ||||| |||||||| ||||||||||| || |||| || ||||||||
Sbjct 462237 TTACAAATCTGCCAACCCATTCGACTTCATGGAAAACATCTCCTTGGCCGGCAAGACCAA 462296
Query 26292 CTTCTTTGAAAAGAGGGTCGGCGACTATCAA 26322
|||||| |||||||| || || || || |||
Sbjct 462297 CTTCTTCGAAAAGAGAGTTGGTGATTACCAA 462327
>seq81
Length=155533
Score = 100 bits (110), Expect = 5e-16
Identities = 385/593 (65%), Gaps = 20/593 (3%)
Strand=Plus/Plus
Query 221942 GTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGA 222001
||| ||||| | | |||| || || || | || ||| |||||||| | |||
Sbjct 111719 GTAGAGAGCCT--CGAACTCCTCGCCATAAACATCTGCCAAACCTGGACATTCGTTGGGG 111776
Query 222002 CACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCAC 222061
||||| ||| |||| | | || | || || | || |||||| || || || ||||||
Sbjct 111777 CACATGAGAGTCCAATCCCCATTCTTTTCAACACGCTTCATGAATAGATCAGGAATCCAC 111836
Query 222062 AGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCC 222121
| || | |||||||| | | || || ||| || | || || | |||||
Sbjct 111837 AAGGCGTAGAAGAGATCGCGTGCACGAACTTCTTCCTTACCATGATTCTTGCGTAGATCA 111896
Query 222122 AAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGC 222181
| ||||| |||| || || ||||| || ||||| || || || | || || || |||
Sbjct 111897 AGGAACTCGAAAACATCCGCATGCCATGGTTCCAGGTAAACAGCAAAGGCACCAGGACGC 111956
Query 222182 TTGTTGCCACCCTGATCCACCATCCTCTC-CAGAGC-GTTGAAGATGCGAAGGGTCGGTA 222239
||||| ||||| ||||| || || ||| ||| | |||||| | || || | || |
Sbjct 111957 TTGTTACCACCTTGATCAAC-ATA-TCTGGCAGTGTTGTTGAAAACTCGGAGCATAGGAA 112014
Query 222240 CCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC 222299
| | |||||||| || ||||| || |||||| ||||| ||| | || | |
Sbjct 112015 CAATACCGTTGGAATTTCCATTGGTACCGGCAATGTATGCACCAGTGGCAC---GGATTC 112071
Query 222300 TGGCAGACATG---CCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAG 222356
|| | || || ||||||||||| | || |||||||| || || |||| | ||
Sbjct 112072 TGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATAGCACAAATCTTCAAAG 112131
Query 222357 TGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCT 222416
| || || || || ||| ||||||||| | || | || || || || || | |
Sbjct 112132 TATCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATAAGGAAGCATGATGAAAGTT 112191
Query 222417 GAGATTTGGTGGA--ACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCT 222474
| | || ||||| || ||| || || || || || ||||| ||||| |
Sbjct 112192 GTGCTT--GTGGAGTACCCGCGGAGAAGAGTGTTGGCGAAGCATGTGTGAAGTACTTGTT 112249
Query 222475 AGACATCAGATCGTACGTCTC--TACGACTCTGGCGATGTTGTCCCCGTGAAT 222525
||||||| || ||| || || || ||||| |||| | || ||||||||
Sbjct 112250 TGACATCAAATTGTATGTTTCGATAGCACTCT--CGATATCATCACCGTGAAT 112300
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928825956061120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |