Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq29 172 4e-37 seq23 93.3 3e-13 seq158 86.0 4e-11 >seq29 Length=315494 Score = 172 bits (190), Expect = 4e-37 Identities = 372/549 (68%), Gaps = 8/549 (1%) Strand=Plus/Plus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 |||||||| ||||| || ||||| ||| |||||| | | | | | ||| || | | Sbjct 24271 ATTGGTATCGATTTGGGTACTACCTACTCTTGTGTGGGTATCTTCCGTGATGATAGAATC 24330 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 ||||| || ||||| |||||||| || | || |||||||| | ||| | || || || Sbjct 24331 GAAATTATCGCCAACGACCAAGGAAACCGTACCACACCATCCTTCGTTGCCTTCACAGAT 24390 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 ||||| | | || |||||||| ||||| |||||| || || || | || || Sbjct 24391 ACTGAGCGCTTGATCGGAGATGCCGCTAAGAATCAAGTCGCCATGAACCCAATCAACACC 24450 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT 474571 | || |||||||| | ||||| ||||| || || | ||| | || ||| | ||| Sbjct 24451 GTCTTCGATGCTAAGCGTTTGATCGGTCGCAAGTTCGCAGATGCTGAAGTTCAAGCCGAT 24510 Query 474572 ATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC--AA 474629 ||| || | || || ||||| || | || || || ||| || || | | Sbjct 24511 ATGAAGCACTTCCCATTCAAGGTCATTGACCGTGCCGGAAAGCCAGTCATTGAGGTCGAG 24570 Query 474630 TACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCA 474689 | || | || || | |||||||| |||| ||| |||| ||||| ||| | || | || Sbjct 24571 TTCAAG--GGAGAGAACAAACAATTCACACCAGAAGAAATCTCTTCCATGATCTTGGTCA 24628 Query 474690 AAATGAAACAAACCGC-GAGCTCATATCTTGGA-CAAGAAGTAACTGATGCAGTAATTAC 474747 | |||| | | ||||| ||| | || || || ||| |||| | || || | || Sbjct 24629 AGATGAGAGAGACCGCTGAGG-CTTACCTCGGTGCAACTGTTAACA-ACGCCGTCGTCAC 24686 Query 474748 TGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGC 474807 || ||||| || || | ||||| ||||||||||| || || || || || ||||| Sbjct 24687 AGTCCCAGCTTACTTCACAGATTCACAACGTCAAGCTACCAAGGACGCTGGTCTCATTGC 24746 Query 474808 AGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCT 474867 |||||||| ||| | ||||| || ||||| || || ||||| || ||||||| ||| | Sbjct 24747 TGGTCTTAACGTTCTTCGTATCATCAATGAGCCTACCGCAGCTGCCATTGCTTACGGTTT 24806 Query 474868 TGATAAGAA 474876 || ||||| Sbjct 24807 GGACAAGAA 24815 Score = 116 bits (128), Expect = 2e-20 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| || | || | || ||||| || || ||| ||||| | || || Sbjct 102459 ACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCGAAAGGGT 102518 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 |||| || || | |||||||| |||||||| | |||||||||||||| ||||| || Sbjct 102519 TCTGCCGTCCTCCAACTGCTTTCCTGCAAAAATCAATCGTTGTTGATCAGGTGGAATGCC 102578 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||| ||||||||| ||| ||| ||||| ||||| | | ||| | Sbjct 102579 CTCCTTGTCCTGAATCTTTGATTTAACATTATCAATGGTATCTGACGATTCCACTTCTAA 102638 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || ||||| || | ||||| || || ||||| Sbjct 102639 TGTAATTGTCTTACCAGTTAAGGTCTTGACAAAGATTTG 102677 Score = 109 bits (120), Expect = 4e-18 Identities = 118/154 (77%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||| ||||||||||| |||||||| ||||||||||||||||| || || || || ||||| Sbjct 102753 ATCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTGGGATACCCTCCTT 102812 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAA 480735 ||||| |||||| || ||| || ||||| || | || | || || ||||| | Sbjct 102813 ATCTTGGATCTTTGACTTTACATTATCGATAGTGTCCGATGATTCAA-CCTCCAGGGTGA 102871 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || ||||| || ||||| |||||||| || Sbjct 102872 TCGTCTTTCCGGTAAGTGTCTTGACGAAAATCTG 102905 Score = 87.8 bits (96), Expect = 1e-11 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||||||||| || ||||| || || | |||||||||||| ||||| || |||||||| Sbjct 102981 ATCTTCAAGTTGTTTGCCAGCGAAGATCAAACGTTGTTGATCGGGAGGGATGCCTTCCTT 103040 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||||||||||| ||| || || || || || | | ||| || || || Sbjct 103041 ATCTTGAATCTTCGATTTAACGTTGTCGATGGTGTCTGAAGATTCGACTTCGAGAGTGAT 103100 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGA 480762 || || ||||| || |||||||||| Sbjct 103101 GGTCTTTCCGGTAAGGGTCTTAACGA 103126 Score = 87.8 bits (96), Expect = 1e-11 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| || ||||| || || || || | ||||| ||| | ||| Sbjct 103198 ACGAAGACGGAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCACTCAAAGT 103257 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||| ||||| ||||| || ||||| | ||| ||||| |||||||||||||| Sbjct 103258 GCGACCATCTTCGAGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGTCAGGAGGAATTCC 103317 Query 480671 TTCCTTGTCTTGAATCTT 480688 |||||||| || ||||| Sbjct 103318 CTCCTTGTCCTGGATCTT 103335 >seq23 Length=365734 Score = 93.3 bits (102), Expect = 3e-13 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || |||| ||||| ||||| || || ||||| ||||||||||| ||||| |||| Sbjct 281311 ATGCCGTCGTTACCGTTCCCGCATACTTCAACGATTCCCAACGTCAAGCTACTAAGGATG 281252 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || |||||| ||| | || ||| | | || | || || ||||| || ||||| | Sbjct 281251 CTGGTCAAATTGCCGGTTTGAACGTTCTCAGAGTTGTCAACGAGCCAACTGCTGCCGCTC 281192 Query 474855 TTGCTTATGGTCTTGATAAGAATTCTGACAA 474885 | ||||| ||| | || ||| || ||||| Sbjct 281191 TCGCTTACGGTTTGGAGAAGGATGAGGACAA 281161 >seq158 Length=74113 Score = 86.0 bits (94), Expect = 4e-11 Identities = 113/154 (73%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| ||||||||||| || || || | || |||||||| || |||||||| ||||| Sbjct 63201 ATCTTCTAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGATCGGGTGGAATTCCCTCCTT 63260 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAA 480735 ||| || ||||| |||||| || || || || | | | || || ||||| | Sbjct 63261 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAA-CCTCGAGGGTGA 63319 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | ||||| || ||||| ||||| ||||| || || Sbjct 63320 TGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTG 63353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268109581655204