Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq7 129 7e-25 >seq7 Length=635569 Score = 129 bits (142), Expect = 7e-25 Identities = 171/235 (73%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 |||||||| ||||| || |||||||| ||||||||||| |||||||| |||||||| || Sbjct 497235 ACACCAATTGGACCAACACCAGGACCACCACCTCCATGAGGAATACAAAATGTCTTGTGA 497294 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | || ||||| |||||||| |||||| |||| ||| || || | || ||| Sbjct 497295 AGGTTAAGATGGCATACATCGGCACCAATTTCACCAGGTGAACATAATCCGATTTGAGCA 497354 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | || || || || | ||| || |||||||||| | |||||| || | |||| | Sbjct 497355 TTCATGTTAGCGCCGTCCATATAAACTTGACCACCATGTTGATGAACAATATCACAT-GC 497413 Query 138363 TGTC-TGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATA 138416 | | |||| | || ||| || || ||| || ||| ||||| ||||||||| Sbjct 497414 AGCCTTGATCTCTGGTTCGAACACCCCAAATGTACTTGGGTATGTGATCATAATA 497468 Score = 105 bits (116), Expect = 8e-18 Identities = 192/281 (68%), Gaps = 0/281 (0%) Strand=Plus/Plus Query 139260 AGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGT 139319 ||||| || | ||||| || |||||||||| || ||| || || | | ||| || Sbjct 498381 AGTCCTTCAGGCCCATGGTAGACTGCATAGAAAGCACTCATGTTGGCCAATAATGCCTGA 498440 Query 139320 GCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGT 139379 || ||||| | ||||| || || || ||||| | |||||||| ||||||||||| | Sbjct 498441 GCCGTGCATACATTACTAGTAGCCTTTTCTCTGCGGATATGCTGTTCTCTAGTTTGCAAA 498500 Query 139380 GCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGT 139439 || ||||| ||| || ||| || ||| || ||| | | | ||||| Sbjct 498501 GCCAATCTCATTGCTTTATCCCCTAGTCTATCCTTCGATACACCAATGAGACGACCAGGA 498560 Query 139440 ATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCC 139499 ||||||||||| || ||||| | || ||||| |||||||| ||||| || || || Sbjct 498561 ATCTTTCTCTTGTATTTGTCACTAACAGCGAAGAAGGCAGCATGTGGACCACCATAACCA 498620 Query 139500 ATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATC 139540 | |||| ||||| | ||| | | || | ||||||||| Sbjct 498621 AATGGAACTCCAAAACGTTGAGCATTTCCAAAAGCAATATC 498661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578986653569960