Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq29 109 1e-18 seq158 98.7 2e-15 >seq29 Length=315494 Score = 109 bits (120), Expect = 1e-18 Identities = 169/238 (71%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCT--CTTTAGAAATAT 193182 || ||| |||||| | | || || |||| ||||| || || | |||| ||| ||| Sbjct 102445 ATCTATTGACCACCACGAAGACGGAGCACCAAGTGCAAGGT-GCTTTCCTTTTGAA-TAT 102502 Query 193183 TATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTT 193242 | || || || | ||||| || || || || ||||| |||||||| |||| |||| Sbjct 102503 TGTAATCCGAAAGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAAATCAATCGTTGTT 102562 Query 193243 GATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGG 193302 ||||||| || || || || || || || || || | ||| | ||| ||| ||||| | Sbjct 102563 GATCAGGTGGAATGCCCTCCTTGTCCTGAATCTTTGATTTAACATTATCAATGGTATCTG 102622 Query 193303 AAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | || || ||||||| || || || ||||| |||| || || ||||| |||||||| Sbjct 102623 ACGATTCCACTTCTAATGTAATTGTCTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 102680 Score = 95.1 bits (104), Expect = 2e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||| | | || || || ||||| | || | ||| || || ||| Sbjct 103184 ATTTGCATACCACCACGAAGACGGAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTA 103243 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| || || | | ||| || | |||||||||||| ||||| || | |||||| Sbjct 103244 TAGTCACTCAAAGTGCGACCATCTTCGAGTTGTTTTCCGGCGAAAATCAAACGCTGTTGG 103303 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 |||||||| ||||| || || || || || |||| || | ||| || || ||| | Sbjct 103304 TCAGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTAACATTGTCGATGGTGTCGCTA 103363 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGT 193336 |||||||| || || || ||||| || || || Sbjct 103364 GACTCAACCTCGAGGGTAATAGTCTTGCCGGT 103395 >seq158 Length=74113 Score = 98.7 bits (108), Expect = 2e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 || || || ||||| | || | | ||| |||| ||| |||||||| || || |||| | Sbjct 63175 ATGTTGTAATCGGAAAGGGTGCGACCATCTTCTAGTTGCTTTCCGGCGAAGATCAATCGC 63234 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 |||||||| || || ||||| || || || || || |||| || | ||| || || Sbjct 63235 TGTTGATCGGGTGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTG 63294 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 || ||||||||||| || || || || ||||| || || || || || || || || ||| Sbjct 63295 TCCGAAGACTCAACCTCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGC 63354 Query 193359 AT 193360 || Sbjct 63355 AT 63356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899636148261360