Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017-
05-31] 1,623 sequences; 40,749,071 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq16 107 2e-17
seq7 93.3 5e-13
>seq16
Length=442798
Score = 107 bits (118), Expect = 2e-17
Identities = 89/109 (82%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|| |||||||| || ||||||||| | || || ||| |||| |||||| | || || |||
Sbjct 359898 GCTGCCAACTATCTTGACATCAAGGCCCTTCTTGATGTTGGATGCAAGACCGTTGCGAAC 359957
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294
|||||||| || ||||| || || ||||||||||| ||||| |||||||
Sbjct 359958 ATGATCAAAGGAAAGTCCCCAGAAGAGATCCGCAAAACCTTCAACATCA 360006
>seq7
Length=635569
Score = 93.3 bits (102), Expect = 5e-13
Identities = 139/194 (72%), Gaps = 5/194 (3%)
Strand=Plus/Minus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||||||||| || ||| | ||||||| |||| ||| |||| |||||| || |||||
Sbjct 462018 ACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCGGCCATGAGACCACGCTT 461959
Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298
||||||||| ||||| | ||| || ||||| || || || || ||||| || ||
Sbjct 461958 CTTGAGCCAGAAGATAGATGCGAAGGATCCGGAGAAGAAAATACCTTCAACGGCAGCGAA 461899
Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCT-CCTTGTTGATCCACTTCATCGCCC 869357
||| || || | ||||||||| ||| | | |||| ||||| || | ||||
Sbjct 461898 TGCGACAAGACGTTGAGCAAAGGTG--GAGTTCTTATCTTG--AATCCATTTGACAGCCC 461843
Query 869358 AGTCGGCCTTTTTC 869371
|||||||||| |||
Sbjct 461842 AGTCGGCCTTCTTC 461829
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107006009019491
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |