Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq16 107 2e-17 seq7 93.3 5e-13 >seq16 Length=442798 Score = 107 bits (118), Expect = 2e-17 Identities = 89/109 (82%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || |||||||| || ||||||||| | || || ||| |||| |||||| | || || ||| Sbjct 359898 GCTGCCAACTATCTTGACATCAAGGCCCTTCTTGATGTTGGATGCAAGACCGTTGCGAAC 359957 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294 |||||||| || ||||| || || ||||||||||| ||||| ||||||| Sbjct 359958 ATGATCAAAGGAAAGTCCCCAGAAGAGATCCGCAAAACCTTCAACATCA 360006 >seq7 Length=635569 Score = 93.3 bits (102), Expect = 5e-13 Identities = 139/194 (72%), Gaps = 5/194 (3%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||||||||| || ||| | ||||||| |||| ||| |||| |||||| || ||||| Sbjct 462018 ACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCGGCCATGAGACCACGCTT 461959 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| ||||| | ||| || ||||| || || || || ||||| || || Sbjct 461958 CTTGAGCCAGAAGATAGATGCGAAGGATCCGGAGAAGAAAATACCTTCAACGGCAGCGAA 461899 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCT-CCTTGTTGATCCACTTCATCGCCC 869357 ||| || || | ||||||||| ||| | | |||| ||||| || | |||| Sbjct 461898 TGCGACAAGACGTTGAGCAAAGGTG--GAGTTCTTATCTTG--AATCCATTTGACAGCCC 461843 Query 869358 AGTCGGCCTTTTTC 869371 |||||||||| ||| Sbjct 461842 AGTCGGCCTTCTTC 461829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107006009019491