Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq158 120 2e-22 seq32 91.5 1e-13 seq29 87.8 1e-12 >seq158 Length=74113 Score = 120 bits (132), Expect = 2e-22 Identities = 157/215 (73%), Gaps = 8/215 (4%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||||| || |||||| || ||||| || || || ||| |||| |||| || Sbjct 63148 ACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACCATCTTCT 63207 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 |||||||||||||||||||||| ||| || || || | || | ||||||||||| | Sbjct 63208 AGTTGCTTTCCGGCGAAGATCAATCGCTGTTGATCGGGTGGAATTCCCTCCTTGTCCTGG 63267 Query 34889 ATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGT 34944 || || ||||| || | ||||| || | ||| || || | ||| ||||| Sbjct 63268 ATCTTGGACTTGAC--AT--TGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGT 63323 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGA 34979 || |||||||||||||| || ||||||||||||| Sbjct 63324 TTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGA 63358 >seq32 Length=306211 Score = 91.5 bits (100), Expect = 1e-13 Identities = 133/186 (72%), Gaps = 8/186 (4%) Strand=Plus/Minus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 |||| || ||||| || || || || | || | || |||| ||||||||| ||||||| Sbjct 242388 CCTTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCCTCCAATTGCTTTCCAGCGAAGA 242329 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 ||| ||||| || || | || | ||||||||||| | || || ||||| || Sbjct 242328 TCAAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGAC--AT- 242272 Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | ||||| || || |||||| |||| ||| |||||||| ||||| |||||||| Sbjct 242271 -TGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTG 242213 Query 34964 ACAAAG 34969 || ||| Sbjct 242212 ACGAAG 242207 >seq29 Length=315494 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 || ||||| | ||||| ||| ||||||||| || || ||||| || ||| |||| || Sbjct 102922 CTGAGGACTAAGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCGGAAAGGGTGCGACCA 102981 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || || ||||| || || |||||||||| ||||| || || | || | || ||||| Sbjct 102982 TCTTCAAGTTGTTTGCCAGCGAAGATCAAACGTTGTTGATCGGGAGGGATGCCTTCCTTA 103041 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | || || ||| ||| | || | || | ||||| || | || ||| Sbjct 103042 TCTTGAATCTTCGATTTAACGTTGTCGATGGTGTCTGAAGATTCGACTTCGAGAGTGATG 103101 Query 34943 GTCTTTCCCGTGAGGGTCTTTAC 34965 |||||||| || |||||||| || Sbjct 103102 GTCTTTCCGGTAAGGGTCTTAAC 103124 Score = 86.0 bits (94), Expect = 4e-12 Identities = 150/216 (69%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | |||||| ||||| ||||| || || ||||| ||| | | | || Sbjct 102469 AGCACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCGAAAGGGTTCTGCCGTCC 102528 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| |||||||| || || |||| |||||| || || | || | ||||||||||| Sbjct 102529 TCCAACTGCTTTCCTGCAAAAATCAATCGTTGTTGATCAGGTGGAATGCCCTCCTTGTCC 102588 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || ||| ||| || || |||| || || | || || || | || || Sbjct 102589 TGAATCTTTGATTTAAC--AT--TATCAATGGTATCTGACGATTCCACTTCTAATGTAAT 102644 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || | |||||| |||||||| ||||| Sbjct 102645 TGTCTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 102680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325686357694637