Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq29 96.9 5e-15 >seq29 Length=315494 Score = 96.9 bits (106), Expect = 5e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 ||||||| || | || || ||||| || || |||||||| | || || ||| | | | Sbjct 102679 TGCAAATCTTTGTCAAGACCTTAACTGGTAAGACAATTACATTAGAAGTGGAATCGTCA- 102621 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| ||| | ||||| ||| || || || || || ||||||||||| |||||| Sbjct 102620 GATACCATTGATAATGTTAAATCAAAGATTCAGGACAAGGAGGGCATTCCACCTGATCAA 102561 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| || | ||||||||||| || || || || || ||||| | | ||||| ||| Sbjct 102560 CAACGATTGATTTTTGCAGGAAAGCAGTTGGAGGACGGCAGAACCCTTTCGGATTACAAT 102501 Query 146211 ATACAAAAAGAA 146222 || ||||| ||| Sbjct 102500 ATTCAAAAGGAA 102489 Score = 91.5 bits (100), Expect = 2e-13 Identities = 147/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 |||| || ||| | || ||| | || ||||| || || || | || || ||| ||| Sbjct 102907 TGCAGATTTTCGTCAAGACACTTACCGGAAAGACGATCACCCTGGAGGTTGAATCATCG- 102849 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || ||||| | |||||||| || || ||| ||| || || || |||||||||||| Sbjct 102848 GACACTATCGATAATGTAAAGTCAAAGATCCAAGATAAGGAGGGTATCCCACCCGATCAA 102789 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| | || || ||||| ||||| ||| | || ||| | || | | ||||| || Sbjct 102788 CAACGTCTTATCTTTGCTGGTAAGCAACTTGAGGATGGACGTACACTTTCGGATTACAAC 102729 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGT 146239 || ||||| ||||||||| | ||||| || Sbjct 102728 ATTCAAAAGGAATCGACTTTACATTTGGT 102700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786150450649160