Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq29 132 4e-25 seq4 122 7e-22 seq54 100 2e-15 seq23 98.7 7e-15 >seq29 Length=315494 Score = 132 bits (146), Expect = 4e-25 Identities = 455/702 (65%), Gaps = 12/702 (2%) Strand=Plus/Minus Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241 |||||||| || || || || ||||| ||||| | ||||| || | || | | | || Sbjct 24965 ACAAGACGGTTGTCGAAGTCCTCACCACCCAAGTGAGTATCACCAGCGGTGGATTTGACC 24906 Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301 | || | || || || | | ||| |||| ||||| ||||| ||||| | ||| Sbjct 24905 TCAAAGATACCCTCCTCGATGGTCAAGAGAGAGACATCGAAAGTTCCTCCACCAAGATCG 24846 Query 282302 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 282361 || || || || || || || || || || | ||| || |||| ||||| Sbjct 24845 AAGATGAGAACGTTACGCTCACCCTCGATCTTCTTGTCCAAACCGTAAGCAATGGCAGCT 24786 Query 282362 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 282421 || || || ||||| || || | | ||| |||||||||||||| || || || || Sbjct 24785 GCGGTAGGCTCATTGATGATACGAAGAACGTTAAGACCAGCAATGAGACCAGCGTCCTTG 24726 Query 282422 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTT-AC 282480 || ||||| | ||||||||| | || || || || || || | ||||| | |||| || Sbjct 24725 GTAGCTTGACGTTGTGAATCTGTGAAGTAAGCTGGGACTGTGACGACGGCGT-TGTTAAC 24667 Query 282481 TTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAAT 282540 | || | ||||| || || | | |||| || || ||||| || || || Sbjct 24666 AGTTGCACCGAGGTAAGCCTCAGCGGTCTCTCTCATCTTGACCAAGATCATGGAAGAGAT 24607 Query 282541 TTGTTCTGGAGAATATTGCTTGGATTCATT---TTGATATGATACTTCAAAATATGGTTT 282597 || |||||| | |||| ||| ||| | |||| | || |||| ||| || Sbjct 24606 TTCTTCTGGTGTGAATTGTTTG--TTCTCTCCCTTGA-ACTCGACCTCAATGACTGGCTT 24550 Query 282598 ATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGG-- 282655 || | ||| || || ||||| | | |||||||| | |||| |||| | Sbjct 24549 TCCGGCACGGTCAATGACCTTGAATGGGAAGTGCTTCATATCGGCTTGA--ACTTCAGCA 24492 Query 282656 TCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACT 282715 || || | | ||| || || || || ||||| || | || ||| |||| || | Sbjct 24491 TCTGCGAACTTGCGACCGATCAAACGCTTAGCATCGAAGACGGTGTTGATTGGGTTCATG 24432 Query 282716 GCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATAT 282775 || |||||| || || |||||||| |||| | || || ||||| || | ||| | Sbjct 24431 GCGACTTGATTCTTAGCGGCATCTCCGATCAAGCGCTCAGTATCTGTGAAGGCAACGAAG 24372 Query 282776 GATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCAT 282835 ||||| || || || || ||||| || || || |||||||| | | || ||| | | Sbjct 24371 GATGGTGTGGTACGGTTTCCTTGGTCGTTGGCGATAATTTCGATTCTATCATCACGGAAG 24312 Query 282836 ACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATA 282877 | ||| |||||| | || || || ||||| ||||||||| Sbjct 24311 ATACCCACACAAGAGTAGGTAGTACCCAAATCGATACCAATA 24270 >seq4 Length=664028 Score = 122 bits (134), Expect = 7e-22 Identities = 144/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 ||||| ||||||||| | | |||||||||||||||||||||||||| | ||||| ||| Sbjct 322767 GGTAAGGAAGGTCGTCTCCGTGGAAATTTGATGGGAAAGCGTGTCGACTTCTCTGCCCGT 322708 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407 || || |||||| |||||| ||| || |||| | || || ||||| |||| | ||| Sbjct 322707 ACTGTCATTACTGGTGATCCCAATCTTTCTCTAGACGAGGTCGGTGTCCCTCGAAGCATT 322648 Query 432408 GCGAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGATTATTTGACTCAA 432467 || | || || |||| | || | ||| ||| || ||||||||| | || ||| Sbjct 322647 GCAAGAATCCTCACTTATCCGGAGACTGTTACACCACTGAATATTGATAAACTGCATCAG 322588 Query 432468 TTAGTGAAAAATGGT 432482 | || ||||||||| Sbjct 322587 CTTGTCAAAAATGGT 322573 >seq54 Length=229993 Score = 100 bits (110), Expect = 2e-15 Identities = 207/306 (68%), Gaps = 8/306 (3%) Strand=Plus/Minus Query 282192 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 282251 |||| ||||||| ||||||||| | || | || | ||||| | || ||| | | Sbjct 186324 TATCGAAATCTTGACCTCCCAAATGGGTGTCACCGGCAGTAGCCTTAACAGTGAAGACAC 186265 Query 282252 CATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 282311 || ||| | | ||||| |||||| ||||||||||| | ||| | || || | Sbjct 186264 CACCTTGGATGTTAAGAAGAGAAACATCGAAAGTTCCACCACCGAGATCGTAGATGAGAA 186205 Query 282312 CATTCATTTCTTTGTCTTGGTTTTT-----ATCAAGACCATACGCAAAAGCAGCAGCAGT 282366 | || |||||| |||| ||| | ||||||| || |||| |||||||| || Sbjct 186204 CGTTACGCTCTTTG--TTGGACTTTCCAGCACCAAGACCGTAAGCAATGGCAGCAGCGGT 186147 Query 282367 TGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGC 282426 || || || || || | | || || |||||||| || || ||||| || ||||| Sbjct 186146 AGGCTCGTTGATGATACGGAGGACGTTTAGACCAGCGATGGCACCAGCATCCTTGGTGGC 186087 Query 282427 TTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTA-CTTCTT 282485 ||| | ||| ||||| || || || |||||||| || ||||| | ||| | |||||| Sbjct 186086 TTGACGTTGGTTGTCGTTGAAGTAAGCTGGAACAGTGATGACGGCTTTTGTGACCTTCTT 186027 Query 282486 TTCCAA 282491 |||| Sbjct 186026 GCCCAA 186021 >seq23 Length=365734 Score = 98.7 bits (108), Expect = 7e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394 || || | ||| || || | ||| ||||||||||| || || | || ||| | ||| || Sbjct 281173 TTCTCCAAACCGTAAGCGAGAGCGGCAGCAGTTGGCTCGTTGACAACTCTGAGAACGTTC 281232 Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454 | ||| |||||| || ||||| ||||| ||||| | ||| |||||||| || ||||| Sbjct 281233 AAACCGGCAATTTGACCAGCATCCTTAGTAGCTTGACGTTGGGAATCGTTGAAGTATGCG 281292 Query 282455 GGAACAGTAATAACGGCAT 282473 ||||| |||| ||||||| Sbjct 281293 GGAACGGTAACGACGGCAT 281311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740550717558798