Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq29 147 4e-30 seq158 120 6e-22 >seq29 Length=315494 Score = 147 bits (162), Expect = 4e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 || |||||||| || ||||| || ||||| ||||| || || || || | | ||| ||| Sbjct 102925 AGGACTAAGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCGGAAAGGGTGCGACCATCT 102984 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || |||||||| ||||| ||||| | | ||||||||| ||||| || |||||||||||| Sbjct 102985 TCAAGTTGTTTGCCAGCGAAGATCAAACGTTGTTGATCGGGAGGGATGCCTTCCTTATCT 103044 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 |||||||| | ||| || || || || || || || ||| ||||| | ||| || ||| Sbjct 103045 TGAATCTTCGATTTAACGTTGTCGATGGTGTCTGAAGATTCGACTTCGAGAGTGATGGTC 103104 Query 82779 TTGCCTGTCAACGTCTTTACAAATAT 82804 || || || | ||||| || | ||| Sbjct 103105 TTTCCGGTAAGGGTCTTAACGACTAT 103130 Score = 134 bits (148), Expect = 3e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || || || | ||| ||||| || || || || ||||| | Sbjct 102680 TACCACCACGGAGACGAAGGACCAAATGTAAAGTCGATTCCTTTTGAATGTTGTAATCCG 102739 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | || || || ||||| || ||||||||||| || | ||||||||| || | Sbjct 102740 AAAGTGTACGTCCATCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTG 102799 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||||||||| ||||||| |||||||| || || || || | ||| | Sbjct 102800 GGATACCCTCCTTATCTTGGATCTTTGACTTTACATTATCGATAGTGTCCGATGATTCAA 102859 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||| || |||||||| || || | ||||| || || |||||||| Sbjct 102860 CCTCCAGGGTGATCGTCTTTCCGGTAAGTGTCTTGACGAAAATCTGCAT 102908 Score = 104 bits (114), Expect = 5e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| ||||| | || ||||| || || ||||| || ||||| ||| Sbjct 103191 TACCACCACGAAGACGGAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCAC 103250 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | | ||| ||||| ||||||||||| || || || | | ||||| || |||| Sbjct 103251 TCAAAGTGCGACCATCTTCGAGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGTCAGGAG 103310 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | ||||| ||||| || || ||||| | || ||||| || || || || ||| || | Sbjct 103311 GAATTCCCTCCTTGTCCTGGATCTTGGACTTAACATTGTCGATGGTGTCGCTAGACTCAA 103370 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCA 82788 | || | || || |||||||| |||| Sbjct 103371 CCTCGAGGGTAATAGTCTTGCCGGTCA 103397 >seq158 Length=74113 Score = 120 bits (132), Expect = 6e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 82602 ACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCT 82661 || ||||| |||||||| || || || || || ||||| || || | | ||| |||||| Sbjct 63148 ACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACCATCTTCT 63207 Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721 ||||| ||||| || ||||| | || |||||||| || || ||||| ||||| || || Sbjct 63208 AGTTGCTTTCCGGCGAAGATCAATCGCTGTTGATCGGGTGGAATTCCCTCCTTGTCCTGG 63267 Query 82722 ATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTG 82781 ||||| | || ||||| || || || || || || || || | || || || ||| Sbjct 63268 ATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTTTTG 63327 Query 82782 CCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || | ||||| || || |||||||| Sbjct 63328 CCCGTGAGGGTCTTGACGAAGATCTGCAT 63356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981806783210197