Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq81 208 2e-48 seq7 114 3e-20 >seq81 Length=155533 Score = 208 bits (230), Expect = 2e-48 Identities = 521/782 (67%), Gaps = 11/782 (1%) Strand=Plus/Minus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 || ||||| || || ||||| || || | || | || ||| | ||||| || || Sbjct 112399 TACTTTGGATTTAAGACTCTCGAGCGATCATACCTTCTACGTCTTGATGGCAAGGTCGCA 112340 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 |||||||| ||||| ||| | | |||||||| |||||||||| || ||||||| | Sbjct 112339 GAACGTCCACAACAAATGATCATGCGTGTTGCCGTTGGTATTCACGGTGATGATATCGAG 112280 Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483 || ||| ||| || || | | || ||| | | |||||| | || || Sbjct 112279 AGTGCTATCGAAACATACAATTTGATGTCAAACAAGTACTTCACACATGCTTCGCCAACA 112220 Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAAC 110543 || || ||| || ||| || |||| | | || ||||| ||| | | || || Sbjct 112219 CTCTTCTCCGCGGGTACTCCACAAGCACAACTTTCATCATGCTTCCTTATCGACATGAAG 112160 Query 110544 GATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC-TGCTCTTATTTCTAAAAA 110602 || || |||||| |||||||| ||| || || |||| |||| | || || || || Sbjct 112159 GAGGACAGTATTGATGGTATTTACGATACT-TTGAAGATTTGTGCTATGATCTCAAAGAA 112101 Query 110603 CTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAAC 110662 | || || |||||| | || |||| || || | | || ||| | || || Sbjct 112100 TGCCGGTGGTATTGGTCTCAACATTCACAGAATCCGTGCCACTGGTGCATACATTGCCGG 112041 Query 110663 AGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAA 110722 | || || ||| | || ||||||| ||| | |||| |||||| ||||||| | Sbjct 112040 TACCAATGGAAATTCCAACGGTATTGTTCCTATGCTCCGAGTTTTCAACAACACTGCCAG 111981 Query 110723 ATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTG 110779 |||||| ||||||||||| ||| | ||| | |||||| | || || ||||| || Sbjct 111980 ATATGTTGATCAAGGTGGTAACAAGCGTCCTGGTGCCTTTGCTGTTTACCTGGAACCATG 111921 Query 110780 GCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAG 110839 |||| | ||| | || || ||| | || || || || ||||| || |||||| | Sbjct 111920 GCATGCGGATGTTTTCGAGTTCCTTGATCTACGCAAGAATCATGGTAAGGAAGAAGTTCG 111861 Query 110840 AGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGA 110899 ||||| ||| | || || || |||||||| | ||| |||||||||| |||||| || | Sbjct 111860 TGCACGCGATCTCTTCTACGCCTTGTGGATTCCTGATCTATTCATGAAGCGTGTTGAAAA 111801 Query 110900 AAATGGCATGTGGTCTCTTATGTGTCCTCATCG-TTCTCCTGGTCTATCTGATGTATATG 110958 ||||| ||| |||| ||||| || || || | ||| ||| | | ||||| |||| Sbjct 111800 GAATGGGGATTGGACTCTCATGTG-CCCCAACGAATGTCCAGGTTTGGCAGATGTTTATG 111742 Query 110959 GAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAA-ACAA 111017 | | ||||| || | || ||||| || || || | ||||||| |||||| || | Sbjct 111741 GCGAGGAGTTCGAGGCTCTCTACGAGGGCTACGAGAAGGCAGGCAAGGGTCGCAAGACTA 111682 Query 111018 ATTCCA-GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCC 111076 || | |||||| | ||||||| | || ||||| ||||| || || |||| ||| Sbjct 111681 --TCAAGGCTCAAAAGCTTTGGTACTCGATTCTTGAGGCACAAACCGAGACCGGAAATCC 111624 Query 111077 TT 111078 || Sbjct 111623 TT 111622 >seq7 Length=635569 Score = 114 bits (126), Expect = 3e-20 Identities = 146/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 131787 TTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTA 131846 ||||| ||||| ||||| || || |||||| | ||||||||||||||| | | | | Sbjct 461816 TTCCTTGCATTAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGATAAGAACTCCA 461875 Query 131847 ATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTT 131906 ||| || | | ||||| || || ||| ||||||||||| ||||| || || | | Sbjct 461876 CCTTTGCTCAACGTCTTGTCGCATTCGCTGCCGTTGAAGGTATTTTCTTCTCCGGATCCT 461935 Query 131907 TCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATC 131966 || ||||||| ||||| ||||||||||| | ||| | |||||| | || ||||| Sbjct 461936 TCGCATCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGGCCGGACTCACCTTCTCCAACG 461995 Query 131967 AATTCATCTCGAGAGATGAAG 131987 || ||||||| | || |||| Sbjct 461996 AACTCATCTCCCGTGACGAAG 462016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186788120598703