Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq29 120 2e-22 seq158 114 8e-21 seq32 86.0 4e-12 >seq29 Length=315494 Score = 120 bits (132), Expect = 2e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | |||||| || | ||||| || ||||| || |||||||| || Sbjct 102453 ACCACCACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCGA 102512 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | |||| ||||| || ||||| ||||||||||| || || ||||| | || Sbjct 102513 AAGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAAATCAATCGTTGTTGATCAGGTGG 102572 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| ||| || || || ||||| || | ||| || ||||||| Sbjct 102573 AATGCCCTCCTTGTCCTGAATCTT-TGATTTAACATTATCAATGGTATCTGACGATTCCA 102631 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || || || ||||| ||||| || || |||||||| |||||| Sbjct 102632 CTTCTAATGTAATTGTCTTACCAGTTAAGGTCTTGACAAAGATTTGCATA 102681 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | |||||||||| ||| || ||||| ||||||||||| || Sbjct 102681 ACCACCACGGAGACGAAGGACCAAATGTAAAGTCGATTCCTTTTGAATGTTGTAATCCGA 102740 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||||| ||| | || || | ||| || || ||||| || | ||| || ||||| | || Sbjct 102741 AAGTGTACGTCCATCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTGG 102800 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| || || || || || || | |||| || | ||||| |||||| | Sbjct 102801 GATACCCTCCTTATCTTGGATCTT-TGACTTTACATTATCGATAGTGTCCGATGATTCAA 102859 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | |||||||| || || || | || || || || ||||||||| Sbjct 102860 CCTCCAGGGTGATCGTCTTTCCGGTAAGTGTCTTGACGAAAATCTGCATA 102909 >seq158 Length=74113 Score = 114 bits (126), Expect = 8e-21 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | | |||||||||||| || ||||| ||| ||||| ||||||||||||| Sbjct 63128 CACCACCACGGAGACGTAACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGG 63187 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | || ||||| | || || | ||| |||||||| || ||||| ||||| ||||| | | Sbjct 63188 AAAGGGTGCGACCATCTTCTAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGATCGGGTG 63247 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | || || ||||| || || | | |||| ||| | |||||| || || Sbjct 63248 GAATTCCCTCCTTGTCCTGGATCTT-GGACTTGACATTGTCGATGGTGTCCGAAGACTCA 63306 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | ||||| ||||| || || | || || || ||||||||||| Sbjct 63307 ACCTCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 63356 >seq32 Length=306211 Score = 86.0 bits (94), Expect = 4e-12 Identities = 129/181 (71%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 33562 TTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATC 33621 ||||| ||||||||||| ||||| || ||| |||| |||||||| ||||| || || ||| Sbjct 242386 TTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCCTCCAATTGCTTTCCAGCGAAGATC 242327 Query 33622 AAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC 33681 ||||| || ||||| | || | || || ||||| || || | | |||| ||| Sbjct 242326 AAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTT-GGACTTGACATTGTC 242268 Query 33682 -ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAA 33740 | ||||||| || || || |||| ||||| || || || || | || || || || Sbjct 242267 GATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 242208 Query 33741 G 33741 | Sbjct 242207 G 242207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328697498132160