Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq81 340 2e-88 seq7 107 3e-18 >seq81 Length=155533 Score = 340 bits (376), Expect = 2e-88 Identities = 1329/2067 (64%), Gaps = 53/2067 (3%) Strand=Plus/Plus Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433 || || ||||| |||| || || | | ||||||| ||||||||| ||||| |||| | Sbjct 110577 GTGAATTGAATAGGTGCTGAGGCAGCCATAGTACGTAAATAGTACATTCCGGTCTTCAAA 110636 Query 68434 CCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATA 68493 || | |||| || ||||||||| ||| | ||| | ||||| || Sbjct 110637 CCCAATTTCCAACCAGCAAAATGCATAGATGTGATCTTGCCCATTGTAGGATCCTTCATG 110696 Query 68494 TGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATA 68553 ||||||||||| |||||| |||||| ||||| || || | ||| || ||||||| | | Sbjct 110697 TGAATATTCATTGATTGAGATTGATCAATGAATGCACCACGATCAGCAGCCATTTGAACA 110756 Query 68554 ATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGG 68613 || | ||||| ||||||||||| |||||| ||| ||||| ||| |||||| Sbjct 110757 ATTGTTCGTTGAGAAATTTCCCAAACAGTCTTGTAAAGAGCCTTGATGTCAGCTGGAATA 110816 Query 68614 CTCG---TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCATTC 68670 | | |||||||||||||||||||||| | || || |||||| || | ||| | Sbjct 110817 TTGGGGATATTTTGAATGGATCCACCATCAGCAATGATACGATTCTTCATGTTGTCAGAC 110876 Query 68671 CACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCA 68730 || | | || | || | || || || ||||| | ||| ||||| || Sbjct 110877 CAGAGACCCATATCAACAAGGTCTTTGAGAAGCCATGGGTTAACGACTTGGAATTCTCCG 110936 Query 68731 GATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCC 68790 | | || | ||| | ||| ||||| || || ||||| | | |||| || || Sbjct 110937 GCAAGAACACGACGGGAGTAGATATTTGAAGTGTAAGGTTCGAAACATTCGTTGAAGCCA 110996 Query 68791 AGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCA 68850 |||||||| | || ||||| ||||||||||| || | | | |||| | || Sbjct 110997 AGAATTTGGGATGTGCTAGCAGTAGGCATAGGTGCAACTAGGAGAGAGTTTCGGATTCCG 111056 Query 68851 TGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTC 68910 ||| |||| | || | | | ||||||||| | ||||| ||| ||| | Sbjct 111057 TGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCAGTAGGTGTAACCCCC 111116 Query 68911 CAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGT 68970 || | ||||||||| || || ||| | || || | ||| ||||| || || Sbjct 111117 CACATATCGTATTGAAGTTCACCCTTAGAGACTGGGGAACCTTGATAGGTTTCGTATGGG 111176 Query 68971 CC---TTCCTGTTC-AGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTC 69026 || ||||| | | | || | | || | | || ||| ||| || || || || Sbjct 111177 CCAAGTTCCTTTGCGATCTCGA-CGGAAGAGGTC---AAGGCAGCGTGGTAGATGGTCTC 111232 Query 69027 GAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAG--A 69084 |||||| | | ||||| | || |||||| | || |||||| | | || || | Sbjct 111233 GAAAATTTGTATGTTGAGGTGTTTGGCTTCTGGGGAGTCAAATGGAAGACG-AAGAGCCA 111291 Query 69085 ATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAA 69144 | ||| ||||| || | || || || || | | ||||||||| ||| | ||| Sbjct 111292 AGAAA-GCATCAGCAAGACCTTGGACTCCGACAGCGATAGGTCGATGACGGAAATTGCTT 111350 Query 69145 CTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCGGACT 69204 ||| || |||| | ||||| || || ||||| ||||| || || | |||| || Sbjct 111351 CTTCTGGCCTCTGCGACTGGATAGTAGTTGATATCGATAATCTTGTTCAAGTTTCTAACG 111410 Query 69205 ACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA-------TCGTCCATCTATAAC 69257 || |||| || || || | || || | |||||| | || | ||| | | Sbjct 111411 ACAACTTGGACAACCTCGTGAAGCTTTTGGAAATCATAAGTTCCCTCATTCATGTTGACG 111470 Query 69258 AAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCA-- 69315 ||| | | || || | || || | ||||| || ||||||| | |||| Sbjct 111471 AAAGTTGGT-AGAGCGATGGAAGCCAAGTTACAGCAAGCAACCTCATCTGG---TGCAGA 111526 Query 69316 -TATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATT 69374 || | | || ||||| || | ||| | ||||| ||||| || | || || Sbjct 111527 GTACTCGACAATTTCTGTGCACAAATTGGAGCTGCGAATAGTACCCAGGTTCTTTTGGTT 111586 Query 69375 ACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGA 69434 |||||| ||||| || || ||||||||||| || || ||| | || || || | || | Sbjct 111587 ACTCTTCTTGTTGCATGCATCCTTGTAAAGCATGAAAGGATTTCCGGTCTCGGTTTGTGC 111646 Query 69435 TTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTTCTCT-- 69492 || | ||| || | ||||| ||| || || |||||| || ||| || Sbjct 111647 CTCAAGAATCGAGTACCAAAGCTTTTGAGCCTTGATA---GTCTTGCGACCCTTGCCTGC 111703 Query 69493 -TTTTCATATTGT--GTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCA 69549 || || || ||| | |||| ||||| || || || ||||||| |||| || Sbjct 111704 CTTCTCGTAGCCCTCGTAGAGAGCC--TCGAACTCCTCGCCATAAACATCTGCCAAACCT 111761 Query 69550 GGACATTCATTTGGACACATCAATGACCACACATCATCATCCTT---AACTCGTTTCATA 69606 |||||||| || || ||||| | | ||| ||| ||| ||| ||| || ||||| Sbjct 111762 GGACATTCGTTGGGGCACATGAGAGTCCA---ATCCCCATTCTTTTCAACACGCTTCATG 111818 Query 69607 AATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCT 69666 |||||||| |||||||| | || |||||||| | | | | |||||| || || Sbjct 111819 AATAGATCAGGAATCCACAAGGCGTAGAAGAGATCGCGTGCACGAACTTCTTCCTTACCA 111878 Query 69667 GTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 69726 ||| || ||||| || ||||| | || ||| | |||||||||||| || || | Sbjct 111879 TGATTCTTGCGTAGATCAAGGAACTCGAAAACATCCGCATGCCATGGTTCCAGGTAAACA 111938 Query 69727 GCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAG 69786 || | | | || || || || || || || ||||| | |||||||||||||| || | Sbjct 111939 GCAAAGGCACCAGGACGCTTGTTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAA 111998 Query 69787 ACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCT 69846 |||| ||||| |||| |||||| || || || ||||| || || | ||| || || Sbjct 111999 ACTCGGAGCATAGGAACAATACCGTTGGAATTTCCATTGGTACCGGCAATGTATGCACCA 112058 Query 69847 CTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 69906 | || || || | ||| ||||| || || || || | || ||||| | |||| Sbjct 112059 GTGGCACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATAGCA 112118 Query 69907 CAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAA 69966 ||| ||||| || || || ||||| || || || || || |||||| | ||| || Sbjct 112119 CAAATCTTCAAAGTATCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATAAGGAAG 112178 Query 69967 CAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTG 70026 || || | ||| ||| ||| ||||| || | ||| || || || || ||| Sbjct 112179 CATGATGAAAGTTGTGCTTGTGGAGTACCCGCGGAGAAGAGTGTTGGCGAAGCATGTGTG 112238 Query 70027 AACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATC-CCACTGATG 70085 || | || | || | || |||||||||||| ||||| || ||||| ||| | || Sbjct 112239 AAGTACTTGTTTGACATCAAATTGTATGTTTCGATAGCACTCTCGATATCATCACCG-TG 112297 Query 70086 AATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTAT 70145 ||| || | || |||||||| | ||| || || || |||||| | || || | Sbjct 112298 AATACCAACGGCAACACGCATGATCATTTGTTGTGGACGTTCTGCGACCTTGCCATCAAG 112357 Query 70146 TTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTA--TGAAAAGTCT 70203 | ||||||||| || ||||| ||||| ||||| || | ||| ||||| ||| Sbjct 112358 ACGTAGAAGGTATGATCGCTCGAGAGTCTTAAATCCAAAGTATTGGTAGTTGAAA--TCT 112415 Query 70204 CTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAACTATATCCATAACA 70263 | ||||| | ||| |||| || |||| |||| || | | |||| | || | || Sbjct 112416 CGGTCGTAGACAATTGCAGAGTTGAGTTCCTCCTCATGTCTCATAAC-ACATTCGAAAGT 112474 Query 70264 GTAGGTG-AGATAATCGGAGATCGTTTACCATTTTTAGGATTAACATAGTTGAATAAATC 70322 | || || || |||||| | | |||||| | || || ||| | | ||||||| Sbjct 112475 TTCCTTGCTAATCATAGGAGATGCTGTGCCATTTCTTGGGTTTGTATATTGGTATAAATC 112534 Query 70323 TTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCT 70382 || || | ||| |||| || |||| ||||| | || || | || || | Sbjct 112535 GCGGATAACGTGCGAGAATTGTTTCTTGGTTTGTTTGTGAAGGTTAGAGACTGCAATACG 112594 Query 70383 GGCTGCTAGAATAGCATAGTCAGGATG 70409 || |||||||| ||||| || ||||| Sbjct 112595 AGCAGCTAGAATGGCATAATCGGGATG 112621 >seq7 Length=635569 Score = 107 bits (118), Expect = 3e-18 Identities = 296/446 (66%), Gaps = 12/446 (3%) Strand=Plus/Minus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 |||||||| |||||||| | || ||||| || || || ||||| |||| || || ||| Sbjct 462329 TTTTGGTAATCACCAACTCTCTTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGTTT 462270 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATA---tttttttttAAATCCTAATTCTGAA 39442 |||||||| || || || || | | || || ||| | ||| || || | Sbjct 462269 TCCATGAAGTCGAATGGGTTGGCAGATTTGTAAACTTTGTCGTTA---CCCAAAGCGATG 462213 Query 39443 ATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATG 39502 | | | ||| ||||||||||| |||||| ||||| | | | ||||| || | Sbjct 462212 AGGAGACGATCAGCAACAAATTCAATGTATTGCTTCATGAGGGTAGAGTTCATGCCCAAA 462153 Query 39503 AGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATT 39562 || | || |||||||| || | || |||| ||||| || ||||| || || || Sbjct 462152 AGAGCACAAGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTTCGACGGCTTCGGTGATG 462093 Query 39563 ATCGATGTT--ACTACCT-CATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAG 39619 | || | || || | | | | | || || ||| | ||| || | | ||| Sbjct 462092 A-CG-TCTTGAACGGCTTGCTTGGATGGGCGG-TGCTTGAGATGGGAGAAGAGGAGGCAT 462036 Query 39620 GCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCA 39679 ||||| || || || || || || | || | |||||| || || |||||||| Sbjct 462035 GCGAAATCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCG 461976 Query 39680 GGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATG 39739 | ||| ||||||||||| |||||||| || || | || || ||||| || ||||| || Sbjct 461975 GCCATGAGACCACGCTTCTTGAGCCAGAAGATAGATGCGAAGGATCCGGAGAAGAAAATA 461916 Query 39740 CCTTCTACTGCTGCAAATGCAACAAG 39765 ||||| || || || ||||| ||||| Sbjct 461915 CCTTCAACGGCAGCGAATGCGACAAG 461890 Score = 100 bits (110), Expect = 4e-16 Identities = 226/334 (68%), Gaps = 7/334 (2%) Strand=Plus/Minus Query 39839 GTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTA-TCTTTAACATATGTATCTAT 39897 || || |||||||| ||||| || ||| ||| | | || || | |||||| || || Sbjct 461759 GTATCAATAGCATTGAAGAGGTA-TGTCTTTTGTGCTTGCTCCTTGATATATGTGTCGAT 461701 Query 39898 TAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACA 39957 | ||| || |||| || || ||||| || ||| || || || ||||| || || Sbjct 461700 GAGAAGAGAGTATGTTTCGGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAGCA 461641 Query 39958 TCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTAT 40017 || ||| || | ||| || || || || |||| || | || || || || || || Sbjct 461640 TCGTGCCTCTGGAATCTGAACTTCACCACTGAATCGCTCAACTAAGTTCTCGTTGACGAT 461581 Query 40018 TCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATAT---TTTTCATCGG- 40073 ||| || ||||| || ||||| | || || ||| || || | ||||| Sbjct 461580 TCCGTCTGATGCGGCGAAGAATGCGAGAACGTGGGAAATGAAGTAACGCTCGTCATCATT 461521 Query 40074 GTGTCAATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAA 40133 | ||| || |||||||| | || ||| ||||||| ||| | ||||| || ||||| | Sbjct 461520 GAGTCTGTTG-TTCCAGTCGTGGAGATCCTTTGATAAATCAATCTCTTCTGCGGTCCAGA 461462 Query 40134 ACGACGCCTCTGCCTTTTTGTACATGTTCCATAT 40167 | || ||||||||||| |||||||| | ||| || Sbjct 461461 AAGATGCCTCTGCCTTCTTGTACATCTGCCAGAT 461428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686894864337720