Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq242 89.7 4e-13 >seq242 Length=18865 Score = 89.7 bits (98), Expect = 4e-13 Identities = 258/394 (65%), Gaps = 21/394 (5%) Strand=Plus/Minus Query 19436 TTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGAC 19495 || |||| ||||| ||| | | || || || || |||||||| |||||||| | ||| Sbjct 5368 TTATAAACGGTCCCGAAGTGCTTAACAAGTACGTTGGTCAATCCGAAGAAAACATCCGAA 5309 Query 19496 GTTTGTTTGCTGACGCTGAAGAAGA--ACAA---AAACGTTTAGGGCGCAAAAGTTCTTT 19550 | ||||| || || ||| |||| |||| ||| | ||| | || | | Sbjct 5308 AGCTCTTTGCCGATGCCGAAAAAGAGTACAAGGAAAAGGGAGAGG-----AGAGCGGTCT 5254 Query 19551 GCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGG------ 19604 || || || || | || |||||||| || | ||||| |||||||| ||| Sbjct 5253 CCATATCATTATTTTCGACGAATTGGATGCTGTGTGTAAACAAAGAGGAAGTGGCGCTGG 5194 Query 19605 ---TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGT 19661 || || ||| || || | ||||||||||||||| |||| ||| | || ||||| Sbjct 5193 CGGTGGAACTGGTGTTGGAGATAGTGTTGTCAATCAACTGTTGTCTAAACTCGATGGTGT 5134 Query 19662 TAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAG 19721 | | || || || |||||| | ||||||| ||||| ||| | |||| | || || Sbjct 5133 TGATCAGCTTAACAATATTCTGCTTATTGGAATGACAAATCGTATGGATATGATTGATGA 5074 Query 19722 CGC-CTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAAT 19780 ||| ||| | | |||| || || || ||| | | || ||||| | | || || ||| Sbjct 5073 CGCTCTTCTCA-GACCAGGACGTTTAGAAGTTCACATGGAAATCTCCCTGCCAGACGAAG 5015 Query 19781 GTGGACGTGTGGAAATTTTAAACATACATACATC 19814 ||| | | ||||| | || || ||||| || Sbjct 5014 CTGGCAGAGCACAAATTCTCAAGATTCATACCTC 4981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397448138196115