Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq81 147 2e-30 seq158 96.9 3e-15 seq29 86.0 5e-12 >seq81 Length=155533 Score = 147 bits (162), Expect = 2e-30 Identities = 295/434 (68%), Gaps = 5/434 (1%) Strand=Plus/Plus Query 131595 CCAAATTGGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCT 131654 ||||| ||||||||| |||| ||||| || | ||| | || |||| |||||| |||| Sbjct 111754 CCAAACCTGGACATTCGTTGGGGCACATGAGAGTCCAATCCCCATTCTTTTCAACACGCT 111813 Query 131655 TCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTG 131714 |||| || | ||| || | ||| || ||||| || ||||| | || ||||| Sbjct 111814 TCATGAATAGATCAGGAATCCACAAGGCGTAGAAGAGATCGCGTGCACGAACTTCTTCCT 111873 Query 131715 TACCCATAAtttttttCAAATTTAAA-AAGTCCAAAATGTCCGCATGCCAGGGTTCCAAA 131773 |||| || ||| || | | || || || |||| ||||||||||| ||||||| Sbjct 111874 TACC-ATGATTCTTGCGTAGATCAAGGAACTCGAAAACATCCGCATGCCATGGTTCCAGG 111932 Query 131774 TACACTGCCATTGCGCCTTTGCGCTT---ACCGCCTTGATTAACATGACGAACCATGTTG 131830 || || || | || || ||||| ||| ||||||| ||||| | | ||||| Sbjct 111933 TAAACAGCAAAGGCACCAGGACGCTTGTTACCACCTTGATCAACATATCTGGCAGTGTTG 111992 Query 131831 TTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAG 131890 ||| | || || | ||| || | | |||||||| ||||||||||| | |||||| Sbjct 111993 TTGAAAACTCGGAGCATAGGAACAATACCGTTGGAATTTCCATTGGTACCGGCAATGTAT 112052 Query 131891 CTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATT 131950 ||| |||| | |||| |||||| |||||| |||||||| ||| | | || ||||| Sbjct 112053 GCACCAGTGGCACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATC 112112 Query 131951 AGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACT 132010 | || || | | | ||| | || ||||| || | |||||| | ||||||| Sbjct 112113 ATAGCACAAATCTTCAAAGTATCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATA 112172 Query 132011 AAAAAGCAAGAGGA 132024 | ||||| || || Sbjct 112173 AGGAAGCATGATGA 112186 >seq158 Length=74113 Score = 96.9 bits (106), Expect = 3e-15 Identities = 174/252 (69%), Gaps = 3/252 (1%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 || || ||||| || | ||||| || ||||| || ||||| ||| | | |||| | Sbjct 63142 CGTAACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACCA 63201 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 ||||| || || || |||||| | || | ||||||||||| || || | ||||| || Sbjct 63202 TCTTCTAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGATCGGGTGGAATTCCCTCCTTG 63261 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||||| || | | || | ||||| | | ||||| || || || || Sbjct 63262 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATG 63321 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC--TAAAAATTTATTA-AAC 27269 | ||||||||| || || || || ||||| ||||| |||| | ||| ||||| || Sbjct 63322 GTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGACTGCCTTTGAAAGATATTAGAAT 63381 Query 27270 CTTATTATATTT 27281 |||| |||||| Sbjct 63382 TTTATCATATTT 63393 >seq29 Length=315494 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTCGTCTTC 27097 ||||||||||| || || || |||||||| ||||| || | | || | || | || || Sbjct 102700 ACCAAATGTAAAGTCGATTCCTTTTGAATGTTGTAATC-CGAAAGTGTACGTCCATCCTC 102758 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 || || ||||| || | || ||||| |||||||| || || | |||||| ||||| Sbjct 102759 AAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTGGGATACCCTCCTTATCTTG 102818 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 |||||| || | | || | |||||| | | |||||| || || || || | || Sbjct 102819 GATCTTTGACTTTACATTATCGATAGTGTCCGATGATTCAACCTCCAGGGTGATCGTCTT 102878 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || || || || || |||||| Sbjct 102879 TCCGGTAAGTGTCTTGACGAAAATCTGCATA 102909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424925994664776