Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq81 235 7e-57 seq7 107 2e-18 >seq81 Length=155533 Score = 235 bits (260), Expect = 7e-57 Identities = 1164/1813 (64%), Gaps = 59/1813 (3%) Strand=Plus/Plus Query 110368 ATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTT 110427 ||||||||| |||||||| | || |||||| | | ||||||||| | || ||| Sbjct 110615 ATAGTACATTCCGGTCTTCAAACCCAATTTCCAACCAGCAAAATGCATAGATGTGATCTT 110674 Query 110428 GGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAAGCGCCC 110487 | ||| || ||| | |||| | ||||| |||| ||| |||||||| || Sbjct 110675 GCCCATTGTAGGATCCTTCATGTGAATATTCATTGATTGAGATTGATCAATGAATGCACC 110734 Query 110488 CCGTTGTGCCGCCATATCAATGACA--TCCTTCATCTTAATTTCCCAAACTGTGCGATAG 110545 || | || ||||| | || | || || | |||||||||||| || || Sbjct 110735 ACGATCAGCAGCCATTTGAACAATTGTTCGTTGAGA--AATTTCCCAAACAGTCTTGTAA 110792 Query 110546 AGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACC 110605 ||| |||||| ||| |||| |||| | |||||| || ||||| || || ||| | Sbjct 110793 AGAGCCTTGATGTCAGCTGGAATATTGGGGATATTTTGAATGGATCCACCA----TCAGC 110848 Query 110606 A-TGA---GATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAG 110661 | ||| ||| |||||| | | ||||||||||| || | ||||| |||| || Sbjct 110849 AATGATACGATTCTTCATGTTGTCAGACCAGAGACCCATATCAACAAGGTCTTTGAGAAG 110908 Query 110662 GTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGT 110721 ||| || | || || || || || | | |||||| |||| || Sbjct 110909 CCATGGGTTAACGACTTGGAATTCTCCGGCAAGAACACGACGGGAGTAGATATTTGAAGT 110968 Query 110722 GTATGGTTCAAAGCATTCATTATTACCCAAGA-TTTGTGCGGTGGAGGCTGTTGGCATTG 110780 ||| ||||| || ||||| || | |||||| |||| | ||| || || ||||| | Sbjct 110969 GTAAGGTTCGAAACATTCGTTGA-AGCCAAGAATTTGGGATGTGCTAGCAGTAGGCATAG 111027 Query 110781 GTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCC 110840 |||| | | ||| ||| || | || | | ||||||| || ||| | | |||| Sbjct 111028 GTGCAACTAGGAGAGAGTTTCGGATTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCCC 111087 Query 110841 AGTCGTAGT--TGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAG--CACCCCTTGG 110896 | || | | || | ||| | ||| ||||||| || | ||||| ||||| | | Sbjct 111088 AATCCCACAAATCAG-TAGGTGTAACCC-CCCACATATCGTATTGAAGTTCACCCTTAGA 111145 Query 110897 GACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTC-ACAGCT 110955 ||| |||| ||| | | ||||||| || | || | | | || | || || | Sbjct 111146 GACTGGGGA--ACCTTGATAGGTTTCGTATGGGCCAAGTTCCTTTGCGATCTCGACGGAA 111203 Query 110956 CGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTC 111015 || ||| | ||||| || ||||| || || || | || | | |||||||| Sbjct 111204 GAGGTCAAGGCA-GCGTGGTAGATGGTCTCGAAAATTTGTATGTTGAGGTGTTTGGCTTC 111262 Query 111016 ATCTGAATCAAATGCGTAGCGGCACAA--AATAAATACATCCGCGAGACCTTGAACACCC 111073 || ||||||| | || | | | || ||| |||| || |||||||| || || Sbjct 111263 TGGGGAGTCAAATG-GAAGACGAAGAGCCAAGAAAG-CATCAGCAAGACCTTGGACTCCG 111320 Query 111074 AAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT-CAACGGGATAAAAATT 111132 | | | ||||||| || || | ||| ||| || ||| | || ||||| | || Sbjct 111321 ACAGCGATAGGTCGATGACGGAAATTGCTTCTTCTGGCC-TCTGCGACTGGATAGTAGTT 111379 Query 111133 TCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT-TCATGAAGTTTTT 111191 | || || | ||| | ||| | |||| ||| | | || ||||| |||| Sbjct 111380 GATATCGATAATCTTGTTCAAGTTTCTAACGACAA-CTTGGACAACCTCGTGAAGCTTTT 111438 Query 111192 CATAATCAAAAGTGCGAGTCTC-TTCAT--TGACATACTTTGGAAGGGCGATTGATGCCA 111248 ||||| |||| | ||| ||||| |||| | |||| || ||||| || |||| Sbjct 111439 GGAAATCATAAGTTCC---CTCATTCATGTTGACGAAAGTTGGTAGAGCGATGGAAGCCA 111495 Query 111249 AATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGG 111308 | || || ||| |||||| | | |||||| | ||||||||| || || |||| Sbjct 111496 AGTTACAGCAAGCAACCTCATCTGGTGCAGAGTACTCGACAATTTCTGTGCACAAATTGG 111555 Query 111309 AACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGA 111368 | || ||| || |||| |||||||||||||||||||||||||| ||||||||||| | Sbjct 111556 AGCTGCGAATAGTACCCAGGTTCTTTTGGTTACTCTTCTTGTTGCATGCATCCTTGTAAA 111615 Query 111369 GCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCG 111427 ||||| | || | || ||||| || |||| | ||||| | | ||||| | | | | Sbjct 111616 GCATGAAAGGATTTCCGGTCTCGGTTTGTGCCTCAAGAATCGAGTACCAAAGCTTTTGAG 111675 Query 111428 GC-TGGTACAATGGCGTTGGCCCGTCCCT-CCGCCTCGTACTTTGTGTAGAGGGCTTCAA 111485 | || || | || | ||| | ||| || |||||| |||||| || || | Sbjct 111676 CCTTGATAGTCTTGC---GACCCTTGCCTGCCTTCTCGTAGCCCTCGTAGAGAGCCTCGA 111732 Query 111486 ACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATT 111545 ||||||| || | || | | |||||| | || || || | |||| ||| | Sbjct 111733 ACTCCTCGCCATAAACATCTGCCAAACCTGGACATTCGTTGGGGCACATGAGAGTCCAAT 111792 Query 111546 GACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGAT 111605 ||| | ||||| ||||||||||| || || |||||||||| || | ||||||| Sbjct 111793 CCCCATTCTTTTCAACACGCTTCATGAATAGATCAGGAATCCACAAGGCGTAGAAGAGAT 111852 Query 111606 CTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATA 111664 | | | || ||| | ||||| | ||| || || |||| ||||||||||| | | | Sbjct 111853 CGCGTGCA-CGAACTTCTTCCTTACCATGATTCTTGCGTAGATCAAGGAACTCGAAAACA 111911 Query 111665 TCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCT 111718 ||||| |||||||| || || || || || | | || ||||| ||| || Sbjct 111912 TCCGCATGCCATGGTTCCAGGTAAACAGCAAAGGCACC---AGGACGCTTGTTACCACCT 111968 Query 111719 TGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGAT 111778 |||| ||||| | || ||| ||| || || || ||||| |||| |||||| | || Sbjct 111969 TGATCAACATATCTGGCAGTGTTGTTGAAAACTCGGAGCATAGGAACAATACCGTTGGAA 112028 Query 111779 TGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCA 111838 | ||||| || || ||| | | |||| | | || |||| | ||| Sbjct 112029 TTTCCATTGGTACCGGCAATGTATGCACCAGTGGCACGGATTCTGTGAATGTTGAGACCA 112088 Query 111839 ATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTG 111898 ||||| || || ||||||||| ||||| | | | ||| | || ||||| | Sbjct 112089 ATACCACCGGCATTCTTTGAGATCATAGCACAAATCTTCAAAGTATCGTAAATACCATCA 112148 Query 111899 ATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCA 111958 || ||||||||| || ||||||||||||| || | || | | ||| ||||| Sbjct 112149 ATACTGTCCTCCTTCATGTCGATAAGGAAGCATGATGAAAGTTGTGCTTGTGGAGTACCC 112208 Query 111959 GCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGT 112017 || |||||| ||||| | || || |||| ||| | | |||||| | |||||| Sbjct 112209 GCGGAGAAGAGTGTTGGCGAAGCATGTGTGAA-GTACTTGTTTGACATCAAATTGTATGT 112267 Query 112018 CTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTA 112077 || | || || || || || ||||| || || | || || ||||||| ||| | Sbjct 112268 TTCGATAGCACTCTCGATATCATCACCGTGAATACCAACGGCAACACGCATGATCATTTG 112327 Query 112078 CTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA-GCTCTTCTCAAGGGTTT 112136 ||||| ||| || ||||||| || ||| |||| || | || ||| || || | Sbjct 112328 TTGTGGACGTTCTGCGACCTTGCCATCAAGACGTAGAAGGTATGATC-GCTCGAGAGTCT 112386 Query 112137 TGAGACCAAAGTA 112149 | | |||||||| Sbjct 112387 TAAATCCAAAGTA 112399 >seq7 Length=635569 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||||||||| || || ||||| || ||||| || |||||| || || | ||||||||| Sbjct 462024 GTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCGGCCATGAGACC 461965 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||| | ||| | |||| ||| || ||||||||||| ||||| || || Sbjct 461964 ACGCTTCTTGAGCCAGAAGATAGATGCGAAGGATCCGGAGAAGAAAATACCTTCAACGGC 461905 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAG-ACTTTGCATCAAACCATTTCATTG 122848 || || || | ||| |||| || |||| | ||| ||| | | || |||||| | | Sbjct 461904 AGCGAATGCGACAAGACGTTGAGCAAAGGTG-GAGTTCTTATCTTGAATCCATTTGACAG 461846 Query 122849 CCCATTTCGCCTTCTTCTCAATACATGGTAC 122879 |||| | |||||||||| ||| || || || Sbjct 461845 CCCAGTCGGCCTTCTTCTTAATGCAAGGAAC 461815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628019258800800