Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq81 134 2e-26 seq7 84.2 2e-11 >seq81 Length=155533 Score = 134 bits (148), Expect = 2e-26 Identities = 391/593 (66%), Gaps = 8/593 (1%) Strand=Plus/Minus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 ||||||| || ||| | ||||| |||||||| || | | ||| || || ||| Sbjct 112320 TCATGCGTGTTGCCGTTGGTATTCACGGTGATGATATCGAGAGTGCTATCGAAACATACA 112261 Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 | || ||| | |||||||| || || || ||||||| || ||| ||| ||||| Sbjct 112260 ATTTGATGTCAAACAAGTACTTCACACATGCTTCGCCAACACTCTTCTCCGCGGGTACTC 112201 Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 || | || | || |||||||| | | |||||||| ||| || || || | Sbjct 112200 CACAAGCACAACTTTCATCATGCTTCCTTATCGACATGAAGGAGGACAGTATTGATGGTA 112141 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432 | ||||| || | ||| ||||| ||||| ||| | |||||||| ||| || Sbjct 112140 TTTACGATACTTTGAAGATTTGTGCTATGATCTCAAAGAATGCCGGTGGTATTGGTCTCA 112081 Query 53433 AC-TGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490 || | | | ||| ||||||| | || || || || || || || || | Sbjct 112080 ACATTCACAGAA--TCCGTGCCACTGGTGCATACATTGCCGGTACCAATGGAAATTCCAA 112023 Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550 || || || ||||||||||| || ||||||||||| ||| | || || | || ||||| Sbjct 112022 CGGTATTGTTCCTATGCTCCGAGTTTTCAACAACACTGCCAGATATGTTGATCAAGGTGG 111963 Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610 | ||||| || | || || | ||||| || || ||||| || || || | || Sbjct 111962 TAACAAGCGTCCTGGTGCCTTTGCTGTTTACCTGGAACCATGGCATGCGGATGTTTTCGA 111903 Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT-T 53668 ||| || || || || |||||| ||| | ||||| | || ||| || || || || | Sbjct 111902 GTTCCTTGATCTACGCAAGAATCATGGTAAGGAAGAAGTTCG-TGCACGCGATCTCTTCT 111844 Query 53669 ACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC 53728 || || |||||||||| || || |||||| | || || ||| | | ||| ||| Sbjct 111843 AC-GCCTTGTGGATTCCTGATCTATTCATGAAGCGTGTTGAAAAGAATGGGGATTGGACT 111785 Query 53729 CTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTT 53781 || |||||||| ||||| || || || | | ||| || || |||||||| Sbjct 111784 CTCATGTGCCCCAACGAATGTCCAGGTTTGGCAGATGTTTATGGCGAGGAGTT 111732 Score = 82.4 bits (90), Expect = 8e-11 Identities = 139/198 (70%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACA--GAAGAGTCTGATTGACATGAG 55785 |||||| ||||| ||| || ||||| ||| | || ||| | | || || | ||| Sbjct 110802 TCAAGGCTCTTTACAAGACTGTTTGGGAAATTTCTCAACGAACAAT-TG-TTCAAATGGC 110745 Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845 ||||||||||||||| | ||| || || || || || |||| || |||| || |||| Sbjct 110744 TGCTGATCGTGGTGCATTCATTGATCAATCTCAATCAATGAATATTCACATGAAGGATCC 110685 Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905 | || ||| |||| | | || ||||| ||| || ||||| ||| | ||||| || Sbjct 110684 TACAATGGGCAAGATCACATCTATGCATTTTGCTGGTTGGAAATTGGGTTTGAAGACCGG 110625 Query 55906 TATGTACTATCTGCGGAC 55923 ||||||||| | || || Sbjct 110624 AATGTACTATTTACGTAC 110607 >seq7 Length=635569 Score = 84.2 bits (92), Expect = 2e-11 Identities = 113/154 (73%), Gaps = 10/154 (6%) Strand=Plus/Minus Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522 |||||||| || | |||||| || ||||||||||| || |||| |||||||| ||||| Sbjct 462323 TAATCACCAACTCTCTTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGTTTTCCATG 462264 Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAA--TAGGCTTCTCCCCAAACTGTGCCATGAGG- 74579 ||||||| ||||| | ||||| | | | | | |||||| || |||||| Sbjct 462263 AAGTCGAATGGGTTGGCAGATTTGTAAACTTTGTCGT-TACCCAAA----GCGATGAGGA 462209 Query 74580 --CGATCCGCCACAAATTGAATGTACTGCGTCAT 74611 ||||| || ||||||| |||||| ||| |||| Sbjct 462208 GACGATCAGCAACAAATTCAATGTATTGCTTCAT 462175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547204898355400