Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017-
05-31] 1,623 sequences; 40,749,071 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq81 134 2e-26
seq7 84.2 2e-11
>seq81
Length=155533
Score = 134 bits (148), Expect = 2e-26
Identities = 391/593 (66%), Gaps = 8/593 (1%)
Strand=Plus/Minus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252
||||||| || ||| | ||||| |||||||| || | | ||| || || |||
Sbjct 112320 TCATGCGTGTTGCCGTTGGTATTCACGGTGATGATATCGAGAGTGCTATCGAAACATACA 112261
Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312
| || ||| | |||||||| || || || ||||||| || ||| ||| |||||
Sbjct 112260 ATTTGATGTCAAACAAGTACTTCACACATGCTTCGCCAACACTCTTCTCCGCGGGTACTC 112201
Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372
|| | || | || |||||||| | | |||||||| ||| || || || |
Sbjct 112200 CACAAGCACAACTTTCATCATGCTTCCTTATCGACATGAAGGAGGACAGTATTGATGGTA 112141
Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432
| ||||| || | ||| ||||| ||||| ||| | |||||||| ||| ||
Sbjct 112140 TTTACGATACTTTGAAGATTTGTGCTATGATCTCAAAGAATGCCGGTGGTATTGGTCTCA 112081
Query 53433 AC-TGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490
|| | | | ||| ||||||| | || || || || || || || || |
Sbjct 112080 ACATTCACAGAA--TCCGTGCCACTGGTGCATACATTGCCGGTACCAATGGAAATTCCAA 112023
Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550
|| || || ||||||||||| || ||||||||||| ||| | || || | || |||||
Sbjct 112022 CGGTATTGTTCCTATGCTCCGAGTTTTCAACAACACTGCCAGATATGTTGATCAAGGTGG 111963
Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610
| ||||| || | || || | ||||| || || ||||| || || || | ||
Sbjct 111962 TAACAAGCGTCCTGGTGCCTTTGCTGTTTACCTGGAACCATGGCATGCGGATGTTTTCGA 111903
Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT-T 53668
||| || || || || |||||| ||| | ||||| | || ||| || || || || |
Sbjct 111902 GTTCCTTGATCTACGCAAGAATCATGGTAAGGAAGAAGTTCG-TGCACGCGATCTCTTCT 111844
Query 53669 ACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC 53728
|| || |||||||||| || || |||||| | || || ||| | | ||| |||
Sbjct 111843 AC-GCCTTGTGGATTCCTGATCTATTCATGAAGCGTGTTGAAAAGAATGGGGATTGGACT 111785
Query 53729 CTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTT 53781
|| |||||||| ||||| || || || | | ||| || || ||||||||
Sbjct 111784 CTCATGTGCCCCAACGAATGTCCAGGTTTGGCAGATGTTTATGGCGAGGAGTT 111732
Score = 82.4 bits (90), Expect = 8e-11
Identities = 139/198 (70%), Gaps = 4/198 (2%)
Strand=Plus/Minus
Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACA--GAAGAGTCTGATTGACATGAG 55785
|||||| ||||| ||| || ||||| ||| | || ||| | | || || | |||
Sbjct 110802 TCAAGGCTCTTTACAAGACTGTTTGGGAAATTTCTCAACGAACAAT-TG-TTCAAATGGC 110745
Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845
||||||||||||||| | ||| || || || || || |||| || |||| || ||||
Sbjct 110744 TGCTGATCGTGGTGCATTCATTGATCAATCTCAATCAATGAATATTCACATGAAGGATCC 110685
Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905
| || ||| |||| | | || ||||| ||| || ||||| ||| | ||||| ||
Sbjct 110684 TACAATGGGCAAGATCACATCTATGCATTTTGCTGGTTGGAAATTGGGTTTGAAGACCGG 110625
Query 55906 TATGTACTATCTGCGGAC 55923
||||||||| | || ||
Sbjct 110624 AATGTACTATTTACGTAC 110607
>seq7
Length=635569
Score = 84.2 bits (92), Expect = 2e-11
Identities = 113/154 (73%), Gaps = 10/154 (6%)
Strand=Plus/Minus
Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522
|||||||| || | |||||| || ||||||||||| || |||| |||||||| |||||
Sbjct 462323 TAATCACCAACTCTCTTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGTTTTCCATG 462264
Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAA--TAGGCTTCTCCCCAAACTGTGCCATGAGG- 74579
||||||| ||||| | ||||| | | | | | |||||| || ||||||
Sbjct 462263 AAGTCGAATGGGTTGGCAGATTTGTAAACTTTGTCGT-TACCCAAA----GCGATGAGGA 462209
Query 74580 --CGATCCGCCACAAATTGAATGTACTGCGTCAT 74611
||||| || ||||||| |||||| ||| ||||
Sbjct 462208 GACGATCAGCAACAAATTCAATGTATTGCTTCAT 462175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547204898355400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |