Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq29 172 6e-38 seq158 158 1e-33 seq81 152 6e-32 seq32 140 4e-28 seq23 86.0 7e-12 >seq29 Length=315494 Score = 172 bits (190), Expect = 6e-38 Identities = 160/203 (79%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||||||||| || ||||||||||| | || | ||| | ||| | ||| | Sbjct 103395 ACCGGCAAGACTATTACCCTCGAGGTTGAGTCTAGCGACACCATCGACAATGTTAAGTCC 103336 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || ||||||||||||||||||||||| ||||| |||||| | ||||| || || || Sbjct 103335 AAGATCCAGGACAAGGAGGGAATTCCTCCTGACCAACAGCGTTTGATTTTCGCCGGAAAA 103276 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 |||||||| |||| ||| || | |||||||| |||| ||||| |||||||| ||| Sbjct 103275 CAACTCGAAGATGGTCGCACTTTGAGTGACTATAACATCCAGAAGGAGTCCACTCTCCAT 103216 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || || | |||||||| ||||| Sbjct 103215 CTCGTTCTCCGTCTTCGTGGTGG 103193 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| |||||||| ||||| || || || |||||||| ||| Sbjct 102908 ATGCAGATTTTCGTCAAGACACTTACCGGAAAGACGATCACCCTGGAGGTTGAATCATCG 102849 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||| | || || || || |||||||| || || || || || Sbjct 102848 GACACTATCGATAATGTAAAGTCAAAGATCCAAGATAAGGAGGGTATCCCACCCGATCAA 102789 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || ||||||||||||||||| ||||||| ||||| || | || || || Sbjct 102788 CAACGTCTTATCTTTGCTGGTAAGCAACTTGAGGATGGACGTACACTTTCGGATTACAAC 102729 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||||||||| ||| | ||| | ||| | ||||| || ||||| Sbjct 102728 ATTCAAAAGGAATCGACTTTACATTTGGTCCTTCGTCTCCGTGGTGG 102682 Score = 129 bits (142), Expect = 7e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||||||||| | || || ||||| ||||| | || || || || Sbjct 102680 ATGCAAATCTTTGTCAAGACCTTAACTGGTAAGACAATTACATTAGAAGTGGAATCGTCA 102621 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| | || | || ||||||||||||||||| ||||| || || || Sbjct 102620 GATACCATTGATAATGTTAAATCAAAGATTCAGGACAAGGAGGGCATTCCACCTGATCAA 102561 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || | |||||||| || ||||| | ||||| | | ||||| | || || ||| Sbjct 102560 CAACGATTGATTTTTGCAGGAAAGCAGTTGGAGGACGGCAGAACCCTTTCGGATTACAAT 102501 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636 | ||||||||| ||| | || | || | |||||||| ||||| ||| Sbjct 102500 ATTCAAAAGGAAAGCACCTTGCACTTGGTGCTCCGTCTTCGTGGTGGTCAA 102450 >seq158 Length=74113 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || ||||| || || || || ||||||||||| Sbjct 63356 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCG 63297 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||| | || || |||||||||||||||||||| || || || Sbjct 63296 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCACCCGATCAA 63237 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || || || || |||||||| || |||| ||| ||||| | || || || Sbjct 63236 CAGCGATTGATCTTCGCCGGAAAGCAACTAGAAGATGGTCGCACCCTTTCCGATTACAAC 63177 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||||| || |||||||| | || || ||||| || ||||| Sbjct 63176 ATCCAAAAGGAGTCTACTCTTCACTTGGTGTTACGTCTCCGTGGTGG 63130 >seq81 Length=155533 Score = 152 bits (168), Expect = 6e-32 Identities = 521/803 (65%), Gaps = 17/803 (2%) Strand=Plus/Plus Query 80948 ACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTG 81007 ||||||| ||||| ||||||||||| || ||| ||||||||||| || ||||| Sbjct 111529 ACTCGACAATTTCTGTGCACAAATTGGAGCTGCGAATAGTACCCAGGTTCTTTTGGTTAC 111588 Query 81008 ACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACT 81067 ||| |||||| || |||||||| |||| | || | ||||||||| |||| || Sbjct 111589 TCTTCTTGTTGCATGCATCCTTGTAAAGCATGAAAGGATTTCCGGTCTCGGTTTGTGCCT 111648 Query 81068 TGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCA 81127 || || | || ||||| || | ||||||| |||||| |||||| | | Sbjct 111649 CAAGAATCGAGTACCAAAGCTTTTGAGCCTTGATAGTCTTGCGACCCTTGCCTGCCTTCT 111708 Query 81128 CATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACT 81187 | || |||| | ||||||| | || | || || | | |||| || | Sbjct 111709 CGTAGCCCTCGTAGAGAGCCTCGAACTCCTCGCCATAAACATCTGCCAAACCTGGACATT 111768 Query 81188 CGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAG 81247 |||| |||||||| || ||| || | || || ||| ||||||||| |||| Sbjct 111769 CGTTGGGGCACATGAGAGTCCAATCCCCATTCTTTTCAACACGCTTCATGAATAGATCAG 111828 Query 81248 GGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGAGG 81306 | ||||| | |||| ||| || ||||| ||| || | || || | ||| || || | Sbjct 111829 GAATCCACAAGGCGTAGAAGAGATCGCGTGCA-CGAACTTCTTCCTTACCATGATTCTTG 111887 Query 81307 CGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCG-A 81365 || | || || || || | | |||||||||||||| ||||| || || || | | | Sbjct 111888 CGTAGATCAAGGAACTCGAAAACATCCGCATGCCATGGTTCCAGGTAAACAGCAAAGGCA 111947 Query 81366 C-----CCCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGC 81420 | | |||| | ||||| || | || || | |||||| ||| || || || Sbjct 111948 CCAGGACGCTTGTTA---CCACCTTGATCAACATATCTGGCAGTGTTGTTGAAAACTCGG 112004 Query 81421 AACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCG 81480 | |||||| | ||||| | || | || || ||||| | || | || |||| Sbjct 112005 AGCATAGGAACAATACCGTTGGAATTTCCATTGGTACCGGCAATGTATGCACCAGTGGCA 112064 Query 81481 CGCACCTTGCTGATTG-AAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCG 81539 || | || ||| || ||||| || ||||| | |||||| ||| |||||| Sbjct 112065 CGGATTCTG-TGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATAGCACAAAT 112123 Query 81540 GTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCT 81599 |||| || || ||||| || || || || || | |||||||| | | ||| || Sbjct 112124 CTTCAAAGTATCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATAAGGAAGCATGA 112183 Query 81600 TGACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAA 81657 ||| | | | |||| | ||| || || ||| |||||||| | || || |||| Sbjct 112184 TGAAAGTT--GTGCTTGTGGAGTACCCGCGGAGAAGAGTGTTGGCGAAGCATGTGTGAAG 112241 Query 81658 TAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATA 81717 || ||||||||||| | || ||||| | | | ||||| |||||||||||| Sbjct 112242 TACTTGTTTGACATCAAATTGTATGTTTCGATAGCACTCTCGATATCATCACCGTGAATA 112301 Query 81718 CCGATAGCTACACGCATAAACAT 81740 || | || |||||||| | ||| Sbjct 112302 CCAACGGCAACACGCATGATCAT 112324 >seq32 Length=306211 Score = 140 bits (154), Expect = 4e-28 Identities = 148/194 (76%), Gaps = 1/194 (1%) Strand=Plus/Plus Query 27403 ATAATGCAA-ATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTC 27461 |||||| || | ||| |||||||| ||||| |||||||| || || |||||||| ||||| Sbjct 242195 ATAATGTAATAGCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTC 242254 Query 27462 AGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGA 27521 || | ||| | ||| | ||| | || || ||||||||||||||||||||||| || Sbjct 242255 CTCCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCCGA 242314 Query 27522 CCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTA 27581 || || ||| | || || ||||| |||||| | ||||| | ||||| || |||| || Sbjct 242315 TCAACAACGTTTGATCTTCGCTGGAAAGCAATTGGAGGACGGACGTACTCTCTCAGATTA 242374 Query 27582 TAATGTCCAAAAGG 27595 || ||||||||| Sbjct 242375 CAACATCCAAAAGG 242388 >seq23 Length=365734 Score = 86.0 bits (94), Expect = 7e-12 Identities = 182/269 (68%), Gaps = 6/269 (2%) Strand=Plus/Plus Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCG 32043 ||||| ||||| ||| ||| | || || || || || ||| ||||| ||||| | Sbjct 62339 GACGGTCTCAAACCTGGACAAAGGAAAGTTATGTATGCTTGCTTCAAGCGCAACCTTACA 62398 Query 32044 AGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAA---CGGCCTATCAC 32100 | ||| |||||||| | | || | || || || ||| ||| ||||||||||| Sbjct 62399 AATGATATGAAGGTTGTTGAACTTGCTGGTTATGT--CAGT-CAAGTCTCGGCCTATCAC 62455 Query 32101 CACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCA 32160 || ||||| || || | || |||||||| ||| || || || | ||| ||| | Sbjct 62456 CATGGCGAAGCTTCAATGCAAATGACCATTGTTGGCCTCGCACAAAATTATGTTGGTTCG 62515 Query 32161 AATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAG 32220 |||||| | || | ||||||||| |||| | ||||| | | || || || | Sbjct 62516 AATAACGTCAATTGTCTCGAGCCAAGTGGAAATTTTGGTAGTAGACTTCAGGGAGGAAGC 62575 Query 32221 GATGCTGCGAGCTCCCGTTACATCTTCAC 32249 |||||||| ||| ||||||| || || || Sbjct 62576 GATGCTGCTAGCGCCCGTTATATTTTTAC 62604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570298829827760