Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq29 120 2e-22 seq158 111 1e-19 >seq29 Length=315494 Score = 120 bits (132), Expect = 2e-22 Identities = 167/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | |||||| || | ||||| ||||||||||| || ||||| ||| Sbjct 102454 CCACCACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCGAA 102513 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||| |||| || | || || || ||||| || || || ||||| || || || Sbjct 102514 AGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAAATCAATCGTTGTTGATCAGGTGGA 102573 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCT-TCGCTCTCCA 34657 | ||||||||||| ||| |||| |||||| || ||| || ||| || | |||| Sbjct 102574 ATGCCCTCCTTGTC-CTGAATCTTTGATTTAACATTATCAATGGTATCTGACGAT-TCCA 102631 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| | || || || ||||| ||||| || || ||||| || ||||| Sbjct 102632 CTTCTAATGTAATTGTCTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 102680 Score = 120 bits (132), Expect = 2e-22 Identities = 162/221 (73%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||||||| | ||| |||||||||||||| ||||| |||||||| || Sbjct 102691 AGACGAAGGACCAAATGTAAAGTCGATTCCTTTTGAATGTTGTAATCCGAAAGTGTACGT 102750 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || |||||||| ||||| ||||| || | ||| ||||| || || || | |||||| Sbjct 102751 CCATCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTGGGATACCCTCC 102810 Query 34609 TTGTCTGTGATCTTTTGTTTTA-ACGATAAAATTGTGTCTTCGCT--CTCCACTTCCACG 34665 || ||| ||||||| |||| | || || ||||| || | || || |||| | Sbjct 102811 TTATCTTGGATCTTTGACTTTACATTAT-CGATAGTGTC--CGATGATTCAACCTCCAGG 102867 Query 34666 GTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || ||||| || ||||| | || || || ||||||||||| Sbjct 102868 GTGATCGTCTTTCCGGTAAGTGTCTTGACGAAAATCTGCAT 102908 Score = 107 bits (118), Expect = 1e-18 Identities = 112/145 (77%), Gaps = 4/145 (3%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC--TG 34537 || || | |||||| | || | |||||||||| |||||| || |||||||| || | Sbjct 103193 CCACCACGAAGACGGAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCACTC 103252 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 |||||| || | ||||| |||||||| ||||| || || |||||||||||||| || | Sbjct 103253 AAAGTG--CGACCATCTTCGAGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGTCAGGAG 103310 Query 34598 GCACTCCCTCCTTGTCTGTGATCTT 34622 | | |||||||||||| |||||| Sbjct 103311 GAATTCCCTCCTTGTCCTGGATCTT 103335 >seq158 Length=74113 Score = 111 bits (122), Expect = 1e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| |||||||| || ||||| ||||||||| ||||| ||||| ||||| || || Sbjct 63139 AGACGTAACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGA 63198 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| ||||| || ||||| || || || |||||||| || || || | ||||||| Sbjct 63199 CCATCTTCTAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGATCGGGTGGAATTCCCTCC 63258 Query 34609 TTGTCTGTGATCTT 34622 ||||| |||||| Sbjct 63259 TTGTCCTGGATCTT 63272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314723374550159