Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017-
05-31] 1,623 sequences; 40,749,071 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq158 136 3e-27
seq29 132 4e-26
seq32 96.9 3e-15
>seq158
Length=74113
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || || || ||||| | || || || || || || | ||
Sbjct 63357 CATGCAGATCTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTC 63298
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || || | ||||| || || || ||||| || || || |||||||||||
Sbjct 63297 GGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCACCCGATCA 63238
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||| || || | |||||| || ||| | ||||| || ||| |||||||||||||
Sbjct 63237 ACAGCGATTGATCTTCGCCGGAAAGCAACTAGAAGATGGTCGCACCCTTTCCGATTACAA 63178
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||| ||||||||||| || | || ||||| || ||| | || |||||
Sbjct 63177 CATCCAAAAGGAGTCTACTCTTCACTTGGTGTTACGTCTCCGTGGTGG 63130
>seq29
Length=315494
Score = 132 bits (146), Expect = 4e-26
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 26994 ATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCG 27053
||| | || || || || ||||| ||| | || ||||| ||||| ||| | || ||| |
Sbjct 103130 ATAGTCGTTAAGACCCTTACCGGAAAGACCATCACTCTCGAAGTCGAATCTTCAGACACC 103071
Query 27054 ATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGT 27113
|| || | || ||| || |||||||| || |||||||| || ||||||||||| |||
Sbjct 103070 ATCGACAACGTTAAATCGAAGATTCAAGATAAGGAAGGCATCCCTCCCGATCAACAACGT 103011
Query 27114 TTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAA 27173
|| || | ||| ||||||||| | ||||| || ||| ||||||| ||||| || ||
Sbjct 103010 TTGATCTTCGCTGGCAAACAACTTGAAGATGGTCGCACCCTTTCCGACTACAATATCCAG 102951
Query 27174 AAGGAGTCGACCTTACATTTGGT 27196
|||||||| ||| | || || ||
Sbjct 102950 AAGGAGTCTACCCTTCACTTAGT 102928
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || || | || || ||| | ||||| | ||||||||| ||||
Sbjct 102680 ATGCAAATCTTTGTCAAGACCTTAACTGGTAAGACAATTACATTAGAAGTGGAATCGTCA 102621
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || ||| ||| ||||| ||||| || ||||| ||||| ||||||
Sbjct 102620 GATACCATTGATAATGTTAAATCAAAGATTCAGGACAAGGAGGGCATTCCACCTGATCAA 102561
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| || || || | || || || || ||||| ||| | ||| |||| ||||||||
Sbjct 102560 CAACGATTGATTTTTGCAGGAAAGCAGTTGGAGGACGGCAGAACCCTTTCGGATTACAAT 102501
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||||||||| ||||| || ||||| | ||| | || |||||
Sbjct 102500 ATTCAAAAGGAAAGCACCTTGCACTTGGTGCTCCGTCTTCGTGGTGG 102454
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || ||||| ||| | || || || || || ||| | ||
Sbjct 102908 ATGCAGATTTTCGTCAAGACACTTACCGGAAAGACGATCACCCTGGAGGTTGAATCATCG 102849
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || || ||| || ||||| || || || || ||||||||||||
Sbjct 102848 GACACTATCGATAATGTAAAGTCAAAGATCCAAGATAAGGAGGGTATCCCACCCGATCAA 102789
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| | || | || || || ||| | || || | || |||| |||||||||
Sbjct 102788 CAACGTCTTATCTTTGCTGGTAAGCAACTTGAGGATGGACGTACACTTTCGGATTACAAC 102729
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||||||||| ||||| ||||||||||| | ||| | || ||||| ||
Sbjct 102728 ATTCAAAAGGAATCGACTTTACATTTGGTCCTTCGTCTCCGTGGTGGTAT 102679
Score = 87.8 bits (96), Expect = 2e-12
Identities = 144/208 (69%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069
||||||||||| ||||||| || || || || | |||| | || || | || ||
Sbjct 103397 TGACCGGCAAGACTATTACCCTCGAGGTTGAGTCTAGCGACACCATCGACAATGTTAAGT 103338
Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129
|| || || ||||| || || || || || || ||||||||||| || | |||||| |
Sbjct 103337 CCAAGATCCAGGACAAGGAGGGAATTCCTCCTGACCAACAGCGTTTGATTTTCGCCGGAA 103278
Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTAC 27189
||||| | ||||| || || | || || ||||| || |||||||| || | |
Sbjct 103277 AACAACTCGAAGATGGTCGCACTTTGAGTGACTATAACATCCAGAAGGAGTCCACTCTCC 103218
Query 27190 ATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| | ||| | ||| | || ||||| ||
Sbjct 103217 ATCTCGTTCTCCGTCTTCGTGGTGGTAT 103190
>seq32
Length=306211
Score = 96.9 bits (106), Expect = 3e-15
Identities = 130/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056
|| || || || || || |||||| | || || ||||| || || | |||||| | ||
Sbjct 242208 TTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATC 242267
Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116
|| | ||||| || || || ||||| || || || || ||||||||||| |||||
Sbjct 242268 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCCGATCAACAACGTTTG 242327
Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176
|| | ||| || || |||||||| ||| | || | || ||||||||||| ||||||
Sbjct 242328 ATCTTCGCTGGAAAGCAATTGGAGGACGGACGTACTCTCTCAGATTACAACATCCAAAAG 242387
Query 27177 G 27177
|
Sbjct 242388 G 242388
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434909576592960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |