Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq158 136 3e-27 seq29 132 4e-26 seq32 96.9 3e-15 >seq158 Length=74113 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || || || ||||| | || || || || || || | || Sbjct 63357 CATGCAGATCTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTC 63298 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | ||||| || || || ||||| || || || ||||||||||| Sbjct 63297 GGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCACCCGATCA 63238 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| || || | |||||| || ||| | ||||| || ||| ||||||||||||| Sbjct 63237 ACAGCGATTGATCTTCGCCGGAAAGCAACTAGAAGATGGTCGCACCCTTTCCGATTACAA 63178 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||| ||||||||||| || | || ||||| || ||| | || ||||| Sbjct 63177 CATCCAAAAGGAGTCTACTCTTCACTTGGTGTTACGTCTCCGTGGTGG 63130 >seq29 Length=315494 Score = 132 bits (146), Expect = 4e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 26994 ATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCG 27053 ||| | || || || || ||||| ||| | || ||||| ||||| ||| | || ||| | Sbjct 103130 ATAGTCGTTAAGACCCTTACCGGAAAGACCATCACTCTCGAAGTCGAATCTTCAGACACC 103071 Query 27054 ATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGT 27113 || || | || ||| || |||||||| || |||||||| || ||||||||||| ||| Sbjct 103070 ATCGACAACGTTAAATCGAAGATTCAAGATAAGGAAGGCATCCCTCCCGATCAACAACGT 103011 Query 27114 TTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAA 27173 || || | ||| ||||||||| | ||||| || ||| ||||||| ||||| || || Sbjct 103010 TTGATCTTCGCTGGCAAACAACTTGAAGATGGTCGCACCCTTTCCGACTACAATATCCAG 102951 Query 27174 AAGGAGTCGACCTTACATTTGGT 27196 |||||||| ||| | || || || Sbjct 102950 AAGGAGTCTACCCTTCACTTAGT 102928 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || | || || ||| | ||||| | ||||||||| |||| Sbjct 102680 ATGCAAATCTTTGTCAAGACCTTAACTGGTAAGACAATTACATTAGAAGTGGAATCGTCA 102621 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| ||| ||||| ||||| || ||||| ||||| |||||| Sbjct 102620 GATACCATTGATAATGTTAAATCAAAGATTCAGGACAAGGAGGGCATTCCACCTGATCAA 102561 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | || || || || ||||| ||| | ||| |||| |||||||| Sbjct 102560 CAACGATTGATTTTTGCAGGAAAGCAGTTGGAGGACGGCAGAACCCTTTCGGATTACAAT 102501 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||||||||| ||||| || ||||| | ||| | || ||||| Sbjct 102500 ATTCAAAAGGAAAGCACCTTGCACTTGGTGCTCCGTCTTCGTGGTGG 102454 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || ||||| ||| | || || || || || ||| | || Sbjct 102908 ATGCAGATTTTCGTCAAGACACTTACCGGAAAGACGATCACCCTGGAGGTTGAATCATCG 102849 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || ||| || ||||| || || || || |||||||||||| Sbjct 102848 GACACTATCGATAATGTAAAGTCAAAGATCCAAGATAAGGAGGGTATCCCACCCGATCAA 102789 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | || || || ||| | || || | || |||| ||||||||| Sbjct 102788 CAACGTCTTATCTTTGCTGGTAAGCAACTTGAGGATGGACGTACACTTTCGGATTACAAC 102729 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||||||||| ||||| ||||||||||| | ||| | || ||||| || Sbjct 102728 ATTCAAAAGGAATCGACTTTACATTTGGTCCTTCGTCTCCGTGGTGGTAT 102679 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 27010 TGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAAC 27069 ||||||||||| ||||||| || || || || | |||| | || || | || || Sbjct 103397 TGACCGGCAAGACTATTACCCTCGAGGTTGAGTCTAGCGACACCATCGACAATGTTAAGT 103338 Query 27070 AAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCA 27129 || || || ||||| || || || || || || ||||||||||| || | |||||| | Sbjct 103337 CCAAGATCCAGGACAAGGAGGGAATTCCTCCTGACCAACAGCGTTTGATTTTCGCCGGAA 103278 Query 27130 AACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTAC 27189 ||||| | ||||| || || | || || ||||| || |||||||| || | | Sbjct 103277 AACAACTCGAAGATGGTCGCACTTTGAGTGACTATAACATCCAGAAGGAGTCCACTCTCC 103218 Query 27190 ATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || | ||| | ||| | || ||||| || Sbjct 103217 ATCTCGTTCTCCGTCTTCGTGGTGGTAT 103190 >seq32 Length=306211 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 || || || || || || |||||| | || || ||||| || || | |||||| | || Sbjct 242208 TTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATC 242267 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | ||||| || || || ||||| || || || || ||||||||||| ||||| Sbjct 242268 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCCGATCAACAACGTTTG 242327 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 || | ||| || || |||||||| ||| | || | || ||||||||||| |||||| Sbjct 242328 ATCTTCGCTGGAAAGCAATTGGAGGACGGACGTACTCTCTCAGATTACAACATCCAAAAG 242387 Query 27177 G 27177 | Sbjct 242388 G 242388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434909576592960