Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq158 179 9e-40 seq29 172 1e-37 seq32 143 6e-29 seq81 89.7 1e-12 >seq158 Length=74113 Score = 179 bits (198), Expect = 9e-40 Identities = 173/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| || | || || | ||||||||| ||||| ||||||||||| ||||| | |||||| Sbjct 63135 ACGGAGACGTAACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGT 63194 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| || ||||| || |||||||| | || ||||| || || |||| ||| Sbjct 63195 GCGACCATCTTCTAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGATCGGGTGGAATTCC 63254 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||||| || || || ||||||||||| || ||||||||||| Sbjct 63255 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAG 63314 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || |||||||| ||||| || || | |||||| Sbjct 63315 GGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 63356 >seq29 Length=315494 Score = 172 bits (190), Expect = 1e-37 Identities = 164/210 (78%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||||||||| ||||| | |||||| || ||||| || ||||| || || || | |||||| Sbjct 102915 ACGAAGTCTGAGGACTAAGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCGGAAAGGGT 102974 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| || || ||||| |||||||| | |||||||| || ||||| | || Sbjct 102975 GCGACCATCTTCAAGTTGTTTGCCAGCGAAGATCAAACGTTGTTGATCGGGAGGGATGCC 103034 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||| || || ||||| ||| ||||| ||||||||||| || ||| || ||||| Sbjct 103035 TTCCTTATCTTGAATCTTCGATTTAACGTTGTCGATGGTGTCTGAAGATTCGACTTCGAG 103094 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102 |||||| |||||||| || || ||||| || Sbjct 103095 AGTGATGGTCTTTCCGGTAAGGGTCTTAAC 103124 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | || | ||| || || ||||| ||||| ||||||| ||| || | |||||| Sbjct 102697 AGGACCAAATGTAAAGTCGATTCCTTTTGAATGTTGTAATCCGAAAGTGTACGTCCATCC 102756 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || ||||| || || |||||||| |||||||| || || || | || ||||| || Sbjct 102757 TCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTGGGATACCCTCCTTATCT 102816 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||| || || || ||||| ||||| || ||||||||| || ||||||||| Sbjct 102817 TGGATCTTTGACTTTACATTATCGATAGTGTCCGATGATTCAACCTCCAGGGTGATCGTC 102876 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || ||||| || || | |||||| Sbjct 102877 TTTCCGGTAAGTGTCTTGACGAAAATCTGCAT 102908 Score = 138 bits (152), Expect = 3e-27 Identities = 154/202 (76%), Gaps = 8/202 (4%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGG 210951 |||||| | || || || || ||||||||||| || ||||||||||| || | ||| | Sbjct 103198 ACGAAGACGGAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCACTCAA-AG 103256 Query 210952 TCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTC 211011 | | |||||||| || || || || ||||| || | || |||||||||||||||| || Sbjct 103257 TGCGACCATCTTCGAGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGTCAGGAGGAATTC 103316 Query 211012 CTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTC---AGAGCTTTCAACCT 211068 | ||||||||||||||||| || || || ||||||||||| ||| ||||||| Sbjct 103317 CCTCCTTGTCCTGGATCTTGGACTTAACATTGTCGATGGTGTCGCTAGA---CTCAACCT 103373 Query 211069 CGAGAGTGATCGTCTTTCCCGT 211090 |||| || || ||||| || || Sbjct 103374 CGAGGGTAATAGTCTTGCCGGT 103395 Score = 125 bits (138), Expect = 2e-23 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | ||| | ||| || ||||| || || ||||||| |||||| Sbjct 102459 ACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCGAAAGGGT 102518 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 || || || |||| |||||| ||||| || || | |||||||| ||||| |||| || Sbjct 102519 TCTGCCGTCCTCCAACTGCTTTCCTGCAAAAATCAATCGTTGTTGATCAGGTGGAATGCC 102578 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||| |||||| ||| || || || ||||| || || ||| || || | Sbjct 102579 CTCCTTGTCCTGAATCTTTGATTTAACATTATCAATGGTATCTGACGATTCCACTTCTAA 102638 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| || || | ||||| ||||| | ||||| Sbjct 102639 TGTAATTGTCTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 102680 >seq32 Length=306211 Score = 143 bits (158), Expect = 6e-29 Identities = 139/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 ||||||||||| ||||| | || || | ||| || |||| ||||| || |||||||| Sbjct 242386 TTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCCTCCAATTGCTTTCCAGCGAAGATC 242327 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 | |||||||| || ||||||| ||| ||||||||||||||||| || || || ||| Sbjct 242326 AAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 242267 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 |||||||| ||| || ||||| || ||||| ||||| ||||| || ||||| || || Sbjct 242266 ATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 242208 >seq81 Length=155533 Score = 89.7 bits (98), Expect = 1e-12 Identities = 187/275 (68%), Gaps = 4/275 (1%) Strand=Plus/Plus Query 178093 GTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCCCAC 178152 |||||||||||| ||||| || ||||| ||||| ||||| || |||| Sbjct 111575 GTTCTTTTGGTTACTCTTCTTGTTGCATGCATCCTTGTAAAGCATGAAAGGATTTCCGGT 111634 Query 178153 CTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTTGGC 178212 ||| | ||| ||| | ||||| | |||||||| || || || |||||| | Sbjct 111635 CTCGGTTTGTGCCTCAAGAATCGAGTACCAAAGCTTTTGAGCCTTGATAGTCTTGCGACC 111694 Query 178213 TTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATCATC 178272 || ||| | |||||||| | |||||| ||||||| ||| ||||| ||||| | Sbjct 111695 CTTGCCTGCCTTCTCGTAGCCCTCGTAGAGAGCCTCGAACTCCTCGCCATAAACATCTGC 111754 Query 178273 GAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACC-GTCTTCCTTC-ACTCGT 178330 | ||| ||| || |||||||| | |||| |||| | || |||| ||| || || Sbjct 111755 CAAACCTGGACATTCGTTGGGGCACATGAGAGTCCAATCCCCATTCTT--TTCAACACGC 111812 Query 178331 TTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365 |||||||| || |||| |||| | ||| ||||| Sbjct 111813 TTCATGAATAGATCAGGAATCCACAAGGCGTAGAA 111847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159127895796395