Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017-
05-31] 1,623 sequences; 40,749,071 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq158 145 2e-29
seq29 114 3e-20
>seq158
Length=74113
Score = 145 bits (160), Expect = 2e-29
Identities = 160/210 (76%), Gaps = 5/210 (2%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| |||||||||||||| ||||||||||||||||||| | || | ||||||||||
Sbjct 63150 CAAG-TGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACCATCTTCTA 63208
Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
| ||||| ||||||||||| | | ||| || || | | ||||| ||||| || ||
Sbjct 63209 GTTGCTTT--CCGGCGAAGATCAATCGCTGTTGATCGGGTGGAATTCCCTCCTTGTCCTG 63266
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
|| || |||||| | || | | |||| ||| ||| || || || || || |||||
Sbjct 63267 GATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTTTT 63326
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||||||| ||||| ||||||| ||||||
Sbjct 63327 GCCCGTGAGGGTCTTGACGAAGATCTGCAT 63356
>seq29
Length=315494
Score = 114 bits (126), Expect = 3e-20
Identities = 150/208 (72%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
||||||||||| | ||||| |||||||| || ||||| ||||| |||| | || |
Sbjct 102919 AGTCTGAGGACTAAGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCGGAAAGGGTGCGA 102978
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
|||||||| || ||| || |||||||| | | || || || | | ||| ||||||
Sbjct 102979 CCATCTTCAAGTTGTTTGCCAGCGAAGATCAAACGTTGTTGATCGGGAGGGATGCCTTCC 103038
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| |||||||| || ||| || | || | | |||||||| || ||||| |||||
Sbjct 103039 TTATCTTGAATCTTCGATTTAACGTTGTCGATGGTGTCTGAAGATTCGACTTCGAGAGTG 103098
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGA 152094
|| || || || || || ||||| ||||
Sbjct 103099 ATGGTCTTTCCGGTAAGGGTCTTAACGA 103126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153796806657033
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |