Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq29 205 2e-47 seq158 168 1e-36 seq32 136 8e-27 seq7 111 3e-19 seq83 98.7 2e-15 >seq29 Length=315494 Score = 205 bits (226), Expect = 2e-47 Identities = 182/228 (80%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| |||| |||||| || ||| ||||| |||||||| || | Sbjct 102681 ACCACCACGGAGACGAAGGACCAAATGTAAAGTCGATTCCTTTTGAATGTTGTAATCCGA 102740 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || || |||||||| ||||| || || |||||||| | ||||||||| || || Sbjct 102741 AAGTGTACGTCCATCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTGG 102800 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||| ||||||||||||| ||||| |||||||||||||||| | ||| || Sbjct 102801 GATACCCTCCTTATCTTGGATCTTTGACTTTACATTATCGATAGTGTCCGATGATTCAAC 102860 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||||||||| || || | ||||| ||||| |||||||| Sbjct 102861 CTCCAGGGTGATCGTCTTTCCGGTAAGTGTCTTGACGAAAATCTGCAT 102908 Score = 167 bits (184), Expect = 5e-36 Identities = 148/185 (80%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || ||||| |||||||| | ||| ||||| ||||| || |||||||| || || ||| Sbjct 102946 TCCTTCTGGATATTGTAGTCGGAAAGGGTGCGACCATCTTCAAGTTGTTTGCCAGCGAAG 103005 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||||||||||||| || || || || ||||| ||||| ||||| | ||| ||| | Sbjct 103006 ATCAAACGTTGTTGATCGGGAGGGATGCCTTCCTTATCTTGAATCTTCGATTTAACGTTG 103065 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| ||||| |||| |||||||||||||||||| ||||| || || | ||||||||| Sbjct 103066 TCGATGGTGTCTGAAGATTCGACTTCGAGAGTGATGGTCTTTCCGGTAAGGGTCTTAACG 103125 Query 283089 AATAT 283093 | ||| Sbjct 103126 ACTAT 103130 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || || |||||||| ||||| || ||||| || | Sbjct 102453 ACCACCACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCGA 102512 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || | ||| ||||| | || || || ||||| ||||| |||||||| ||| || Sbjct 102513 AAGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAAATCAATCGTTGTTGATCAGGTGG 102572 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| || ||||||| ||| || |||| || || || || | ||| || Sbjct 102573 AATGCCCTCCTTGTCCTGAATCTTTGATTTAACATTATCAATGGTATCTGACGATTCCAC 102632 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | || || |||||||| || || ||||| || || || ||||| Sbjct 102633 TTCTAATGTAATTGTCTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 102680 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || ||||| | ||| || || |||||||| |||||| Sbjct 103192 ACCACCACGAAGACGGAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCACT 103251 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | ||||| ||||| || |||||||| ||||| || |||||||| ||||||||| || Sbjct 103252 CAAAGTGCGACCATCTTCGAGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGTCAGGAGG 103311 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| | || || | ||||| ||||| || || || Sbjct 103312 AATTCCCTCCTTGTCCTGGATCTTGGACTTAACATTGTCGATGGTGTCGCTAGACTCAAC 103371 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCA 283077 ||||| || || ||||| || |||| Sbjct 103372 CTCGAGGGTAATAGTCTTGCCGGTCA 103397 >seq158 Length=74113 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || | |||| || | || || |||||||||||||| || | Sbjct 63129 ACCACCACGGAGACGTAACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGA 63188 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| ||||| |||||||| || ||||| |||||||| || ||||| || || Sbjct 63189 AAGGGTGCGACCATCTTCTAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGATCGGGTGG 63248 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| | || || | ||||| |||||||||| || || Sbjct 63249 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAAC 63308 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| || || ||||| | ||||| ||||| |||||||| Sbjct 63309 CTCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 63356 >seq32 Length=306211 Score = 136 bits (150), Expect = 8e-27 Identities = 149/196 (76%), Gaps = 3/196 (2%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 |||||||||||||| || | || || || || ||||| | ||| || || || |||||| Sbjct 242386 TTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCCTCCAATTGCTTTCCAGCGAAGATC 242327 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 ||||||||||| || ||||| ||||||||||| |||||||| | || || | ||| Sbjct 242326 AAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 242267 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA- 283090 || ||||| || | ||||| || || ||||| ||||| ||||| | ||||| ||||| Sbjct 242266 ATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAG 242207 Query 283091 -TATCTGCATTTTCAT 283105 ||| | |||| |||| Sbjct 242206 CTAT-TACATTATCAT 242192 >seq7 Length=635569 Score = 111 bits (122), Expect = 3e-19 Identities = 306/465 (66%), Gaps = 8/465 (2%) Strand=Plus/Plus Query 229950 TTTGCAGAGCGTCTCGTCGCGTGGGTGTGCGTTGAGGGTATTCTGTTCTCCGGGAGTTTC 230009 ||||| | ||||| ||||| | | |||||| |||||| | |||||||| ||| Sbjct 461878 TTTGCTCAACGTCTTGTCGCATTCGCTGCCGTTGAAGGTATTTTCTTCTCCGGATCCTTC 461937 Query 230010 TGCGCCATCTTTTGGCTACGCAACAAGGGCG---TCATGCCCGGGCTCGGTCTGTCGAAC 230066 | ||||| ||||| ||| ||| | | ||||| |||| ||| | || ||| Sbjct 461938 GCATCTATCTTCTGGCT---CAAGAAGCGTGGTCTCATGGCCGGACTCACCTTCTCCAAC 461994 Query 230067 GAATTCATCAGCAGGGACGAAGGTCTTCACCAGCAATTTGGCGAGG-TCTTGTATTCGAA 230125 ||| ||||| | | ||||||||||| ||| | | |||| || | || | | || | Sbjct 461995 GAACTCATCTCCCGTGACGAAGGTCTCCAC-ACCGATTTCGCATGCCTCCTCTTCTCCCA 462053 Query 230126 GCTAAATAACAAACTACCTTTCGAAACGGTGAAACAAATCGTCACAGAAGTAGTTGCAAA 230185 || || || | | | || | || || | || |||| |||| || | || Sbjct 462054 TCTCAAGCACCGCCCATCCAAGCAAGCCGTTCAAGACGTCATCACCGAAGCCGTCGAAAT 462113 Query 230186 TGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCT 230245 || | || ||| | ||| ||| ||||||| |||| | |||||||| || || Sbjct 462114 CGAGCAAGAATTCTTGACCGAGGCTCTTCCTTGTGCTCTTTTGGGCATGAACTCTACCCT 462173 Query 230246 CATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAA 230305 |||| |||||| || ||||| || ||||||||| | || | || | || |||| || Sbjct 462174 CATGAAGCAATACATTGAATTTGTTGCTGATCGTCTCCTCATCGCTTTGGGTAACGACAA 462233 Query 230306 AGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAAC 230365 ||| || || || ||||| |||| || ||||| ||| || | || || || Sbjct 462234 AGTTTACAAATCTGCCAACCCATTCGACTTCATGGAAAACATCTCCTTGGCCGGCAAGAC 462293 Query 230366 TAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 ||||||||||||||| | || | ||||| |||| | ||||||| Sbjct 462294 CAACTTCTTCGAAAAGAGAGTTGGTGATTACCAAAAGGCCGGTGT 462338 >seq83 Length=151564 Score = 98.7 bits (108), Expect = 2e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 316983 GTCGAGGTCATGCTCAACATATGCAGTTTTCAGAATATCCTTCGTCGGGAACCCTTCCAA 317042 |||||| || |||||||| | |||| || | | |||| | ||||| || || | Sbjct 81837 GTCGAGATCGTGCTCAACGAACACAGTCTTGACCTCACTCTTCTTGGGGAAACCCTCAAC 81896 Query 317043 CTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAG 317102 || |||| ||| || | ||| || || ||||| || | ||| || || |||||||| Sbjct 81897 TTGCTCGTTGTTAATAGCACGCATGAGAGTAGACTTTCCGGAACCGTTAGGACCGCAAAG 81956 Query 317103 ACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACC 317162 |||||| || | || ||| ||| | | |||||||||| ||||||||||| |||| Sbjct 81957 ACCATATCGTTGACCACGCTTGAGACGGAGATGGGTGTTGTTAAGAAGAATCTTGGCACC 82016 Query 317163 ATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 ||||||| ||| ||||| || || |||||||| Sbjct 82017 GTATGCCAAGTTGAAGGTACAATTGCAAAGATCCTCGCC 82055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046717433385442