Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq158 141 7e-29 seq32 120 2e-22 seq29 111 1e-19 >seq158 Length=74113 Score = 141 bits (156), Expect = 7e-29 Identities = 162/216 (75%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 44126 AACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCG 44185 ||||||| |||||| || ||||||||||||||||||||||| || ||| | || Sbjct 63145 AACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACCATCT 63204 Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245 || || ||||| ||||| |||||||| ||||| ||||| | || | || ||||| ||| Sbjct 63205 TCTAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGATCGGGTGGAATTCCCTCCTTGTCC 63264 Query 44246 GTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCG 44303 ||||| ||| || ||| | |||||||| | || || ||||| | || || | Sbjct 63265 TGGATCTTGGACTTGACATTGT--CGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGG 63322 Query 44304 TCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGA 44339 | || |||||||||||||| |||||||| ||||||| Sbjct 63323 TTTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGA 63358 >seq32 Length=306211 Score = 120 bits (132), Expect = 2e-22 Identities = 138/184 (75%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 ||||||||||||||||||| | ||| || |||| |||| ||||| || || |||| Sbjct 242388 CCTTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCCTCCAATTGCTTTCCAGCGAAGA 242329 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265 ||||||| || ||||| | ||| | || ||||| ||| ||||| ||| || ||| Sbjct 242328 TCAAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 242269 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | |||||||||| ||| || ||||| | || || ||||| ||||| |||||||| || Sbjct 242268 --CGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGAC 242211 Query 44326 GAAG 44329 |||| Sbjct 242210 GAAG 242207 >seq29 Length=315494 Score = 111 bits (122), Expect = 1e-19 Identities = 155/213 (73%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCT--CGTCG 44185 ||||| ||| | ||||| |||||||| || |||||||| | || || || |||| Sbjct 102471 CACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCGAAAG--GGTTCTGCCGTCC 102528 Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245 |||| |||||| || ||||| ||||| || || ||||| | || | || ||||| ||| Sbjct 102529 TCCAACTGCTTTCCTGCAAAAATCAATCGTTGTTGATCAGGTGGAATGCCCTCCTTGTCC 102588 Query 44246 GTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 ||||| || || || || | ||||| || | |||||||| || | ||||| || Sbjct 102589 TGAATCTT-TGATTTAACATTATCAATGGTATCTGACGATTCCACTTCTAATGTAATTGT 102647 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || | |||||| || ||||||||||| Sbjct 102648 CTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 102680 Score = 105 bits (116), Expect = 5e-18 Identities = 158/222 (71%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||||| | || | |||||| || |||||| ||||| ||||| || Sbjct 102906 CATACCACCACGAAGTCTGAGGACTAAGTGAAGGGTAGACTCCTTCTGGATATTGTAGTC 102965 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || ||| | || || || || || || || ||||||||||| || ||||| | Sbjct 102966 GGAAAGGGTGCGACCATCTTCAAGTTGTTTGCCAGCGAAGATCAAACGTTGTTGATCGGG 103025 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATT 44285 ||| | |||||||| || |||||| | || || ||| | |||||||| | |||| Sbjct 103026 AGGGATGCCTTCCTTATCTTGAATCTTC-GATTTAACGTTGTCGATGGTGTCTGAAGATT 103084 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327 | || || | || || |||||||| || |||||||| |||| Sbjct 103085 CGACTTCGAGAGTGATGGTCTTTCCGGTAAGGGTCTTAACGA 103126 Score = 102 bits (112), Expect = 6e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 |||||||| ||||||||||| | ||| || | || || || ||||| || |||||| Sbjct 102718 TCCTTTTGAATGTTGTAATCCGAAAGTGTACGTCCATCCTCAAGTTGCTTACCAGCAAAG 102777 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 || | ||| || ||||| | || | ||| ||||| || ||||| ||| | | Sbjct 102778 ATAAGACGTTGTTGATCGGGTGGGATACCCTCCTTATCTTGGATCTTTGACTTTACATTA 102837 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | || ||||| | ||||| ||||||| || ||||||||||| || || ||||| ||| Sbjct 102838 TCGATAGTGTCCGATGATTCAACCTCCAGGGTGATCGTCTTTCCGGTAAGTGTCTTGACG 102897 Query 44327 AAGATTTGCAT 44337 || || ||||| Sbjct 102898 AAAATCTGCAT 102908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359983279277391