Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20curreyana_20[genbank_20GCA_5F002162495.1_202017- 05-31] 1,623 sequences; 40,749,071 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq158 154 4e-32 seq29 136 1e-26 seq32 125 2e-23 >seq158 Length=74113 Score = 154 bits (170), Expect = 4e-32 Identities = 158/205 (77%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || ||||| |||||||||||||| || || ||| Sbjct 63353 CAGATCTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCGGAC 63294 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| |||||||| || ||||| || || || || || Sbjct 63293 ACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCACCCGATCAACAG 63234 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | |||||||||||||| || || |||||||| | || ||| ||||||| ||| || Sbjct 63233 CGATTGATCTTCGCCGGAAAGCAACTAGAAGATGGTCGCACCCTTTCCGATTACAACATC 63174 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| || || || || || |||| Sbjct 63173 CAAAAGGAGTCTACTCTTCA-CTTG 63150 >seq29 Length=315494 Score = 136 bits (150), Expect = 1e-26 Identities = 146/193 (76%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || || || ||||| || ||||| ||||| || ||| ||||||||||||| Sbjct 103126 TCGTTAAGACCCTTACCGGAAAGACCATCACTCTCGAAGTCGAATCTTCAGACACCATCG 103067 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | ||||| ||| |||||||| || || ||||| |||||||| || || ||||| | | Sbjct 103066 ACAACGTTAAATCGAAGATTCAAGATAAGGAAGGCATCCCTCCCGATCAACAACGTTTGA 103007 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 ||||||| || ||||| || |||||||| | || ||| |||| || || |||| || | Sbjct 103006 TCTTCGCTGGCAAACAACTTGAAGATGGTCGCACCCTTTCCGACTACAATATCCAGAAGG 102947 Query 178111 AATCAACACTGCA 178123 | || || || || Sbjct 102946 AGTCTACCCTTCA 102934 Score = 134 bits (148), Expect = 3e-26 Identities = 146/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || || || ||||| ||||||||||| ||||| ||| || ||| Sbjct 102905 CAGATTTTCGTCAAGACACTTACCGGAAAGACGATCACCCTGGAGGTTGAATCATCGGAC 102846 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || |||||| || || || || || ||||| || || || ||| Sbjct 102845 ACTATCGATAATGTAAAGTCAAAGATCCAAGATAAGGAGGGTATCCCACCCGATCAACAA 102786 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| || || || || || || |||||| | || ||| | ||||| ||| | Sbjct 102785 CGTCTTATCTTTGCTGGTAAGCAACTTGAGGATGGACGTACACTTTCGGATTACAACATT 102726 Query 178104 CAAAAAGAATCAAC 178117 ||||| ||||| || Sbjct 102725 CAAAAGGAATCGAC 102712 Score = 116 bits (128), Expect = 9e-21 Identities = 140/189 (74%), Gaps = 6/189 (3%) Strand=Plus/Minus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACCATCGAGAACGTCAAA 178001 || || || || || ||||||||||| || ||| ||||||||||| || || || Sbjct 103395 ACCGGCAAGACTATTACCCTCGAGGTTGAGTCTAGC---GACACCATCGACAATGTTAAG 103339 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| |||||||| || ||||| ||||| ||||| || || | || ||||||||| Sbjct 103338 TCCAAGATCCAGGACAAGGAGGGAATTCCTCCTGACCAACAGCGTTTGATTTTCGCCGGA 103279 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTG 178121 ||||| ||||||||||| | ||| | || |||||| |||| || || || || || Sbjct 103278 AAACAACTCGAAGATGGTCGCACTTTGAGTGACTATAACATCCAGAAGGAGTCCACTCTC 103219 Query 178122 CATCTTGTT 178130 ||||| ||| Sbjct 103218 CATCTCGTT 103210 Score = 98.7 bits (108), Expect = 2e-15 Identities = 135/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || | || || || || || || | || |||||| ||||| Sbjct 102677 CAAATCTTTGTCAAGACCTTAACTGGTAAGACAATTACATTAGAAGTGGAATCGTCAGAT 102618 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || ||| ||||||||||||||| || || || || || || || ||| Sbjct 102617 ACCATTGATAATGTTAAATCAAAGATTCAGGACAAGGAGGGCATTCCACCTGATCAACAA 102558 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | || || || ||||| ||| | || || || || || ||| | ||||| || | Sbjct 102557 CGATTGATTTTTGCAGGAAAGCAGTTGGAGGACGGCAGAACCCTTTCGGATTACAATATT 102498 Query 178104 CAAAAAGAA 178112 ||||| ||| Sbjct 102497 CAAAAGGAA 102489 >seq32 Length=306211 Score = 125 bits (138), Expect = 2e-23 Identities = 135/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 ||||| || || || || || || || |||||||| ||||| || ||| ||||||||| Sbjct 242208 TTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATC 242267 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || || ||||| ||||| |||||||| || ||||| ||||| || || ||||| | Sbjct 242268 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCCGATCAACAACGTTTG 242327 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 |||||||| ||||| || | || || ||| | ||||| | ||||| ||| ||||||| Sbjct 242328 ATCTTCGCTGGAAAGCAATTGGAGGACGGACGTACTCTCTCAGATTACAACATCCAAAA 242386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203706168785862