Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq7 145 8e-30 >seq7 Length=2023280 Score = 145 bits (160), Expect = 8e-30 Identities = 342/511 (67%), Gaps = 4/511 (1%) Strand=Plus/Minus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 |||||||||| | ||| | ||||||||||||||||| ||||| | | || ||||||| Sbjct 1768569 TTTGGTAATCACCAACTCTCTTTTCGAAAAAGTTAGTCTTGCCGGCCAAGGAAATATTCT 1768510 Query 16734 CCATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793 ||||||| ||||| ||||| | || | | | ||| || |||| || || | Sbjct 1768509 CCATGAAGTCAAATGGATTGGCAGATTTGTAGACTTTGTCGTTGCCCAAAGCGATGAGGA 1768450 Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGAC 16853 | ||| || || ||||| || || || ||| | | ||||||| |||| |||| Sbjct 1768449 GACGATCAGCAACGAATTCGATGTACTGCTTCATGAGGGTGGAGTTCATGCCTAGAAGA- 1768391 Query 16854 GTAC-CGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAAT-AAT 16911 | || |||||||| || ||||| ||| |||||| || | || || || | || | Sbjct 1768390 GCACAAGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTGCGACGGCCTCGGTGATGACG 1768331 Query 16912 ACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAA 16971 || | || || || ||| || || || ||||| || | || |||||||| Sbjct 1768330 TCTTG-GACAGCTTGCTTGGATGGGCGGTGCTTGAGATGGGAGAAGAGGAGGCATGCGAA 1768272 Query 16972 ATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCAT 17031 |||| || | || ||||| | | ||| |||||||| ||||| || | |||| ||| Sbjct 1768271 ATCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTTGAAAAGGTGAGTCCGGCCAT 1768212 Query 17032 CTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTC 17091 || || ||||| | ||| || || | |||||| || || || || || ||||| || Sbjct 1768211 GAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAAAAGATACCTTC 1768152 Query 17092 GACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTT 17151 |||| || || |||| | |||| || | || | || || | |||||||||| Sbjct 1768151 AACGGCAGCGAATGCGACAAGACGTTGAGCAAAGGTGGAGTTCTTATCTTGAATCCATTT 1768092 Query 17152 CTGCACCCACTCGGCTTTTTGCTTTATGCAA 17182 |||| ||||| || | ||| |||||| Sbjct 1768091 GACAGCCCAGTCGGCCTTCTTCTTGATGCAA 1768061 Score = 96.9 bits (106), Expect = 4e-15 Identities = 194/287 (68%), Gaps = 3/287 (1%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 ||||| || |||||||| || ||| |||||||||| ||||||||||| || || Sbjct 1767958 ATATATGTGTCGATGAGAAGAGAGTATGTTTCGGAGTGAATGTTCTCCATCATGATTTGG 1767899 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| |||||||| || || | ||||||||||| | |||||| || | | Sbjct 1767898 AAACCGTAGAAGCATCGTGCCTCTGGGATTTGAACTTCACCACTGAATCGCTCAACCAAG 1767839 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 || ||||| || || ||||| |||||||| || || | | || ||||| || Sbjct 1767838 TTCTCGTTGACAATTCCGTCTGATGCGGCGAAGAATGCGAGAACGTGGGAGATGAAGTAA 1767779 Query 17414 TTTTCGTCCGGTGTAAG---AACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCT 17470 ||||| | || | |||||| | | ||| || || | ||| | ||| Sbjct 1767778 CGCTCGTCATCATTGAGTCTGTTGTTCCAGTCGTGGAGATCCTTTGACAAATCAATCTCT 1767719 Query 17471 TCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517 || | |||||| ||| ||| |||||||||| ||||| | ||| || Sbjct 1767718 TCTGCGGTCCAGAAAGATGCCTCTGCCTTTTTGTACATCTGCCAGAT 1767672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517543206351600