Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017-
05-31] 370 sequences; 44,096,448 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq7 87.8 2e-12
>seq7
Length=2023280
Score = 87.8 bits (96), Expect = 2e-12
Identities = 194/288 (67%), Gaps = 5/288 (2%)
Strand=Plus/Minus
Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531
||||| || || || || | | ||| |||| ||||| |||||||| || || ||
Sbjct 1767958 ATATATGTGTCGATGAGAAGAGAGTATGTTTCGGAGTGAATGTTCTCCATCATGATTTGG 1767899
Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591
|| || ||||||||||| ||||| | ||||| ||||| | ||||| || ||| |
Sbjct 1767898 AAACCGTAGAAGCATCGTGCCTCTGGGATTTGAACTTCACCACTGAATCGCTCAACCAAG 1767839
Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATAT 16651
||||| || || || ||||| ||| || || || || | | ||| ||||| ||
Sbjct 1767838 TTCTCGTTGACAATTCCGTCTGATGCGGCGAAGAATGCGAGAACGTGGGAGATGAAGTAA 1767779
Query 16652 TTTTCGTCAGATGTAAG---AATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCT 16708
|||||| | || | | ||| || | | ||| || || | ||| | |||
Sbjct 1767778 CGCTCGTCATCATTGAGTCTGTTGTTCCAGTCGTGGAGATCCTTTGACAAATCAATCTCT 1767719
Query 16709 TCTGGCGTCCA-AAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755
|||| ||||| |||| | ||| |||||||||| ||||| | ||| ||
Sbjct 1767718 TCTGCGGTCCAGAAAGAT-GCCTCTGCCTTTTTGTACATCTGCCAGAT 1767672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511412034708400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |