Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq7 140 3e-28 seq15 118 1e-21 seq1 93.3 4e-14 seq12 87.8 2e-12 >seq7 Length=2023280 Score = 140 bits (154), Expect = 3e-28 Identities = 204/285 (72%), Gaps = 5/285 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||||||||| ||||| || |||||||||| || ||| | || || Sbjct 1767672 ATCTGGCAGATGTACAAAAAGGCAGAGGCATCTTTCTGGACCGCAGAAGAGATTGATTTG 1767731 Query 116696 TCCAAGGA-CACGAGCGACTGGGAGCGCT---TGAACGACAACGAGCGCCATTTCATCAA 116751 || ||||| | | | ||||||| | | | || || ||||||| | |||||| Sbjct 1767732 TCAAAGGATCTCCA-CGACTGGAACAACAGACTCAATGATGACGAGCGTTACTTCATCTC 1767790 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||||| || || || |||||||| ||||| || ||||||||||| |||| ||||| Sbjct 1767791 CCACGTTCTCGCATTCTTCGCCGCATCAGACGGAATTGTCAACGAGAACTTGGTTGAGCG 1767850 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| | || || || | | ||||| || ||||||||||| || || ||| || Sbjct 1767851 ATTCAGTGGTGAAGTTCAAATCCCAGAGGCACGATGCTTCTACGGTTTCCAAATCATGAT 1767910 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTA 116916 ||||||| | ||||| |||| || || ||||||||||| || Sbjct 1767911 GGAGAACATTCACTCCGAAACATACTCTCTTCTCATCGACACATA 1767955 Score = 104 bits (114), Expect = 2e-17 Identities = 268/401 (67%), Gaps = 8/401 (2%) Strand=Plus/Plus Query 117038 CGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATA 117097 || || || || ||||| ||||| || || |||| || || || |||||| | || Sbjct 1768128 CGTCTTGTCGCATTCGCTGCCGTTGAAGGTATCTTTTTCTCCGGATCCTTCGCCTCTATC 1768187 Query 117098 TTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGAC--TTTCAGCAACGAGCTCATCT 117155 || ||||||||||| || || |||||| |||| || || ||||| ||||| ||||||| Sbjct 1768188 TTCTGGCTCAAGAAGCGTGGTCTCATGGCCGGACTCACCTTTTCA--AACGAACTCATCT 1768245 Query 117156 CCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGC 117215 || | ||||| ||||| || ||| || || || | || ||| ||| | ||| | Sbjct 1768246 CCCGTGACGAAGGTCTCCACACCGATTTCGCATGCCTCCTCTTCTCCCATCTCAAGCACC 1768305 Query 117216 GACCGAGCGCGGCGCGC-GTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGC 117274 | || | | || || ||| || || ||||||| || ||||| |||||||| Sbjct 1768306 G-CCCATCCAAGCAAGCTGTCCAAGACGTCATCACCGAGGCCGTCGCAATCGAGCAAGAA 1768364 Query 117275 TTCCTCACCGAAGCGCTGCC-GGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCA 117333 ||| | ||||| || || || |||| ||| || || | || | | ||| ||| Sbjct 1768365 TTCTTGACCGAGGCTCTTCCTTGTGC-TCTTCTAGGCATGAACTCCACCCTCATGAAGCA 1768423 Query 117334 ATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAA 117393 |||||||| ||||| || || | || || ||| ||| | || ||| |||||| Sbjct 1768424 GTACATCGAATTCGTTGCTGATCGTCTCCTCATCGCTTTGGGCAACGACAAAGTCTACAA 1768483 Query 117394 CACGCCCAACCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434 | |||| || | ||||| ||| | || ||||||| Sbjct 1768484 ATCTGCCAATCCATTTGACTTCATGGAGAATATTTCCTTGG 1768524 >seq15 Length=1659866 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||||||||||||| |||| || || | || Sbjct 675466 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCC 675525 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| ||||| || || | ||||| Sbjct 675526 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCACCCGACCAA 675585 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||| | |||| ||| || || || || || || | |||||||| ||| |||||| Sbjct 675586 CAGCGATTGATCTTCGCCGGAAAGCAACTCGAAGATGGTCGCACCCTTTCCGATTACAAC 675645 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||| |||||| | || || || | ||||| || Sbjct 675646 ATCCAAAAGGAGTCTACTCTTCACTTGGTGTTACG 675680 >seq1 Length=3544467 Score = 93.3 bits (102), Expect = 4e-14 Identities = 130/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGA 40772 || || || ||||| ||| |||| || || ||| ||||| | | | |||| ||||| Sbjct 2378572 ACCGGTAAGACCATTACCCTCGAGGTTGAGTCCAGCGACACCATCGACAACG-TCAAGTC 2378514 Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832 || || | ||||| ||||| || || | ||||| || || | |||| ||| || || Sbjct 2378513 CAAGATCCAGGACAAGGAGGGAATTCCTCCCGACCAACAGCGTTTGATCTTCGCCGGAAA 2378454 Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 ||| || || || | |||||| | | ||||||||||||||||||||| |||| || || Sbjct 2378453 ACAACTTGAAGATGGTCGCACCTTGAGTGACTACAACATCCAGAAGGAGTCCACTCTCCA 2378394 >seq12 Length=1765576 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || |||||||| ||||||||| | || ||||| || |||||| | | Sbjct 99016 TTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATC 99075 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| ||||| || || | || || ||||| | Sbjct 99076 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCCGATCAACAACGTTTG 99135 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| || || || |||| |||| || || ||| || ||||||||||| ||| Sbjct 99136 ATCTTCGCTGGAAAGCAATTGGAAGACGGACGTACTCTCTCAGATTACAACATCCAAAAG 99195 Query 40879 G 40879 | Sbjct 99196 G 99196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515216817111200