Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq1 118 2e-21 seq21 105 1e-17 >seq1 Length=3544467 Score = 118 bits (130), Expect = 2e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| | || ||||| || || || |||| | ||| | Sbjct 2377858 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACAATTACATTAGAAGTGGAATCGTCA 2377799 Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| |||| ||||| || || ||||| || || || || || ||||||||||| Sbjct 2377798 GATACCATTGATAATGTTAAATCA-AAGATTCAGGACAAGGAGGGCATTCCACCTGATCA 2377740 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | | || ||||||||||| || || ||||| | |||| | ||||| || Sbjct 2377739 ACAACGATTGATCTTTGCAGGAAAGCAGTTGGAGGACGGCAGAACCCTTTCGGATTACAA 2377680 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 ||||||||| ||| || ||||| ||||| | ||| | || |||||| Sbjct 2377679 TATTCAAAAGGAAAGCACCTTGCACTTGGTGCTCCGTCTTCGTGGTGGT 2377631 >seq21 Length=772658 Score = 105 bits (116), Expect = 1e-17 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 205560 TACATGAAATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATCTATAGG 205619 ||| | ||||||| |||| ||||||||||||| |||| | | |||| | Sbjct 133152 TACGTAAAATTGTGCAAACATGTGACAAGGTGGTAATGCCATTAACTTGATATCTGCAAC 133211 Query 205620 ATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattttttattttatttatAAT 205679 |||||| || | | || || | ||| || ||||| |||| ||| || ||| Sbjct 133212 ATTCCATGCGCTCAGAATAATCCTCCTATCCCATGGGTTATTCTTTAATTTCCATACAAT 133271 Query 205680 ATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATATATTTAGC 205739 | | || |||||||| ||||| ||| |||| ||| || |||||| ||||| || Sbjct 133272 TTCCGCTAGTTGATCAACACCTTGTCCTGTGTAATCTGTCTCGGCATCAATGTATTTGGC 133331 Query 205740 ACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTC 205787 ||| ||||| ||||||||||| ||||| || ||||||||||| ||||| Sbjct 133332 ACCGAAATGTCGCCATTGAAACCCATACACAGGACCTAAATCTCCTTC 133379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755452506016000