Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1 120 3e-22 seq15 114 1e-20 >seq1 Length=3544467 Score = 120 bits (132), Expect = 3e-22 Identities = 169/235 (72%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 42950 CTATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTA 43009 |||||| || || | | ||| | |||||| ||||| ||||| ||||||||||||||||| Sbjct 2377625 CTATTGACCACCACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTA 2377684 Query 43010 ATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 43069 ||| | || || | |||| || | |||||| || || || || | ||| || || || Sbjct 2377685 ATCCGAAAGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGATC 2377744 Query 43070 GGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCG 43128 | || | || |||||||||| ||| | |||| ||| | | | | || || || Sbjct 2377745 AGGTGGAATGCCCTCCTTGTCC-TGAATCTTTGATTTAACATTATCAATGGTATCTGACG 2377803 Query 43129 ATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||||| || | || || || ||||| || | ||||| |||||||||||||| Sbjct 2377804 ATTCCACTTCTAATGTAATTGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 2377858 >seq15 Length=1659866 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| |||||||| || | || ||||||||| || |||||||| | || || || | Sbjct 675681 ACGTAACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACC 675622 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || || ||||| || ||||| || | |||||| ||||||| || | | |||||| Sbjct 675621 ATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGAATTCCCTCCTT 675562 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 |||| ||| || |||| | | | |||||| || || || |||| ||||| Sbjct 675561 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGAT 675502 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||||||||||| || ||||| || ||||| ||||| Sbjct 675501 GGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 675466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571814955343600