Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017-
05-31] 370 sequences; 44,096,448 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq1 127 2e-24
seq15 125 6e-24
>seq1
Length=3544467
Score = 127 bits (140), Expect = 2e-24
Identities = 151/205 (74%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||| | | ||| | |||||||| || ||| ||||||||| ||||||||||| ||
Sbjct 2378370 CCACCACGAAGTCTGAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCACTC 2378429
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
| |||| | || || ||||||||||||||||| ||||| |||||||||||||||||
Sbjct 2378430 AAGGTGCGACCATCTTCAAGTTGTTTTCCGGCGAAGATCAAACGCTGTTGGTCGGGAGGA 2378489
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| |||||||||||| || || ||| || | | | |||| | ||| |||
Sbjct 2378490 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTGGACTCAACC 2378549
Query 45290 TCCACGGTAATCGTCTTGCCCGTCA 45314
|| | |||||| ||||| || ||||
Sbjct 2378550 TCGAGGGTAATGGTCTTACCGGTCA 2378574
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||| | | ||| | |||||||| || || ||| ||||| || || || |||
Sbjct 2378088 CCACCACGAAGTCTGAGGACCAAGTGAAGGGTAGACTCTTTCTGGATATTATAATCGGAA 2378147
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| |||| | || |||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct 2378148 AGGGTGCGACCATCTTCCAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGAGGA 2378207
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| || |||||||| ||| || |||||| | | | |||| | || |||
Sbjct 2378208 ATGCCTTCCTTGTCTTGAATCTTAGACTTAACGTTGTCGATGGTGTCTGAAGATTCGACC 2378267
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
|| | ||| || ||||| || || |||||||| ||
Sbjct 2378268 TCAAGGGTGATGGTCTTTCCGGTAAGAGTCTTAAC 2378302
>seq15
Length=1659866
Score = 125 bits (138), Expect = 6e-24
Identities = 156/214 (73%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 45124 TAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTC 45183
||| |||||||| || || |||||| || |||||||| ||| || |||| | ||
Sbjct 675678 TAACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACCATC 675619
Query 45184 GTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243
|| ||||| ||||||||||| ||||| |||||||||||||| || | |||||||||||
Sbjct 675618 TTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGAATTCCCTCCTTGTC 675559
Query 45244 CGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGT 45303
| || || ||| || | | | |||| | ||| ||||| | ||| || ||
Sbjct 675558 CTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGT 675499
Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|||||||| || ||||| || ||||| ||||||
Sbjct 675498 TTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 675465
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395073418457770
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |