Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017-
05-31] 370 sequences; 44,096,448 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq4 215 5e-51
seq7 123 2e-23
seq1 96.9 3e-15
>seq4
Length=2560074
Score = 215 bits (238), Expect = 5e-51
Identities = 603/917 (66%), Gaps = 10/917 (1%)
Strand=Plus/Plus
Query 23065 GTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTT 23124
|||||| || ||||| || || | |||| | || || |||| || | |||||
Sbjct 940837 GTACTCGACGATTTCCGTGCACAAATTGGAGCTGCGAATAGTACCCAGGTTCTTTTGGTT 940896
Query 23125 GCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGA 23184
||| || ||||| | ||||||||| |||||| | || | || |||||| || |
Sbjct 940897 GCTCTTCTTGTTGCATGCATCCTTGTAAAGCATGAAAGGATTTCCGGTCTCGGTTTGAGC 940956
Query 23185 CTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACCT-GCCTTCTT 23243
||| | || | ||| | | ||||| | | | ||| || ||| |||| | |
Sbjct 940957 CTCAAGAATGGAGTACCAAAGTTTTTGAGCCTTGATA-GTCTTGCGACCCTTGCCTGCCT 941015
Query 23244 CCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCG 23303
||||| | ||| | || || || || | || ||| || || | || ||
Sbjct 941016 TTTCGTAACCCTCGTAGAGAGCCTCGAACTCCTCGCCATAAACATCTGCTAAACCTGGAC 941075
Query 23304 ATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGAT 23363
||| | || ||||||||| |||| | | |||||||| || |||| || ||||
Sbjct 941076 ATTCGTTGGGGCACATGAGAGTCCAATCTCCATTCTTTTCAACACGCTTCATGAATAGAT 941135
Query 23364 CCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCT 23423
| || ||||| | |||||||| || ||||| || || || || || ||||| || | |
Sbjct 941136 CAGGAATCCACAAGGCGTAGAAGAGATCGCGTGCACGAACTTCTTCCTTGCCA-TGAT-T 941193
Query 23424 TTTTC--AAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAA 23481
||| | | ||| | || || || || ||||||||||| ||||| |||||||| |||||
Sbjct 941194 TTTGCGTAGATCAAGGAACTCAAAAACATCCGCATGCCATGGCTCAAGGTAAACAGCAAA 941253
Query 23482 CGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCT 23541
|| || || | |||||| || || ||||| || || | ||| ||||||||| | ||||
Sbjct 941254 GGCACCAGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAAACTCG 941313
Query 23542 TAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGC 23601
||||| || |||| ||||| || || || || | | || | ||
Sbjct 941314 GAGCATAGGAACGATGCCGTTAGAGTTTCCATTGGTACCGGCTATGTATGCGCCAGTAGC 941373
Query 23602 TCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTG 23661
|| | ||||| | || ||| || || || | || || ||||| || ||
Sbjct 941374 ACGGATTCGGTGAATATTGAGACCAATACCACCAGCATTCTTTGAGATCATAGCACAAAT 941433
Query 23662 TTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGA 23721
|||| ||| ||||| || || || || |||||||| || | ||| | ||| || ||
Sbjct 941434 CTTCAAAGTATCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATAAGGAAGCATGA 941493
Query 23722 AGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTA 23781
|| | ||| |||| || ||| | || ||||| ||||| || ||| || || |||||
Sbjct 941494 TGAAAGTTGTGCTTGTGGAGTACCCGCAGAGAAGAGTGTTGGCGAGGCATGTGTGAAGTA 941553
Query 23782 TCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACC 23841
|| ||||| | ||||| || |||||||| |||||||| || ||||| |||||
Sbjct 941554 CTTGTTTGACATCAAGTTGTATGTTTCGATGGCACTTTCAATGTCATCACCGTGAATACC 941613
Query 23842 GATGGCGACGCGCATCATCATGTATTGAGGTC--TCTCGACCGTGACGCCGTTAATTTTG 23899
| ||| || ||||| ||||| | ||| || | ||| | | | ||| | ||
Sbjct 941614 AACGGCAACACGCATGATCATTTGTTGTGGACGTTCTGCAACTT--TGCCATCAAGACGT 941671
Query 23900 AACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCG 23959
| || ||||| || | | || || |||||||| || | |||||| || || || |||
Sbjct 941672 AGAAGGTATGATCGCTCGAGAGTCTTGAATCCAAAGTATTGATAGTTGAAATCTCGGTCG 941731
Query 23960 TGCACTATGGCCGAATT 23976
| || ||||| |||||
Sbjct 941732 TAGACAATGGCAGAATT 941748
>seq7
Length=2023280
Score = 123 bits (136), Expect = 2e-23
Identities = 229/333 (69%), Gaps = 5/333 (2%)
Strand=Plus/Plus
Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629
|| ||| | ||||||||||||||||| ||||| || ||||||| ||||| | || ||
Sbjct 1767672 ATCTGGCAGATGTACAAAAAGGCAGAGGCATCTTTCTGGACCGCAGAAGAGATTGATTTG 1767731
Query 57630 TCTAAGGATCTGAGCGATTGGGATTCC---CTCAAAGAATCTGAGAGAAATTTTATTAAA 57686
|| |||||||| ||| ||| | | ||||| || ||| | | || ||
Sbjct 1767732 TCAAAGGATCTCCACGACTGGAACAACAGACTCAATGATGACGAGCGTTACTTCATCTCC 1767791
Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746
||||| | || || ||||||||||| || || ||||| |||||||| ||||| || ||
Sbjct 1767792 CACGTTCTCGCATTCTTCGCCGCATCAGACGGAATTGTCAACGAGAACTTGGTTGAGCGA 1767851
Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806
|| ||||| ||| | | ||||| ||||||| ||||| || ||| | ||
Sbjct 1767852 TTCAGTGGTGAAGTTCAAATCCCAGAGGCACGATGCTTCTACGGTTTCCAAATCATGATG 1767911
Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA-CAACGA 57865
|| ||| | || || |||| || || || |||||||| || || | ||||| ||| |
Sbjct 1767912 GAGAACATTCACTCCGAAACATACTCTCTTCTCATCGACACATATATCAAGGAGCAAGCA 1767971
Query 57866 CGAGAAACGTAGACTGTTCAACGCGATCGAAAC 57898
| | | || || || ||||| || || || ||
Sbjct 1767972 CAAAAGACATA-CCTCTTCAATGCTATTGATAC 1768003
>seq1
Length=3544467
Score = 96.9 bits (106), Expect = 3e-15
Identities = 155/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262
|||| |||||||| || || || || |||||| | || || ||| | || |||| |||
Sbjct 2378304 TCGTTAAGACTCTTACCGGAAAGACCATCACCCTTGAGGTCGAATCTTCAGACACCATCG 2378245
Query 31263 A-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321
| |||| | | | ||| | | ||||||||||| | || |||||||| |||||| |
Sbjct 2378244 ACAACGTTAAGTCTAAGATTCAAG-ACAAGGAAGGCATTCCTCCCGACCAACAGCGTTTG 2378186
Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381
|| ||||| || || || ||||||| | || | ||||||||| || || |||
Sbjct 2378185 ATTTTCGCCGGAAAGCAACTGGAAGATGGTCGCACCCTTTCCGATTATAATATCCAGAAA 2378126
Query 31382 GAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || || ||||| |||| || ||||| | || ||||
Sbjct 2378125 GAGTCTACCCTTCACTTGGTCCTCAGACTTCGTGGTGGTA 2378086
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| ||||| || || || || || ||||| | || |||||| | ||
Sbjct 2378086 ATGCAGATTTTCGTCAAGACCCTTACCGGAAAGACAATCACTTTGGAGGTTGAATCATCG 2378027
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | |||| | || || || || || ||||| || | || ||||| ||
Sbjct 2378026 GATACCATCGACAATGTGAAGTCGAAGATCCAAGATAAGGAGGGTATCCCACCCGATCAA 2377967
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| ||||| || || ||||| || || | || ||| | || | ||||| |||
Sbjct 2377966 CAACGTCTTATCTTTGCTGGTAAGCAACTTGAGGACGGTCGTACACTTTCGGATTACAAC 2377907
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||||||| ||||||||| | ||| |||| ||| | || | || ||||
Sbjct 2377906 ATTCAAAAGGAATCGACTTTACATTTGGTCCTTCGTCTCCGTGGTGGTA 2377858
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445764338330400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |