Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq7 102 2e-16 >seq7 Length=2023280 Score = 102 bits (112), Expect = 2e-16 Identities = 349/540 (65%), Gaps = 8/540 (1%) Strand=Plus/Plus Query 101851 CATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGAT---TTGGC 101907 |||||||||||||| | |||||| | || ||||| ||| || ||| || || Sbjct 1768064 CATCAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGATAAGAACTCCACCTTTGC 1768123 Query 101908 GGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATC 101967 ||| |||| || || ||||| |||||||| ||||| || || | ||||| || Sbjct 1768124 TCAACGTCTTGTCGCATTCGCTGCCGTTGAAGGTATCTTTTTCTCCGGATCCTTCGCCTC 1768183 Query 101968 CATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027 || |||||| ||||||| | ||| | || | || ||||||| || || || |||| Sbjct 1768184 TATCTTCTGGCTCAAGAAGCGTGGTCTCATGGCCGGACTCACCTTTTCAAACGAACTCAT 1768243 Query 102028 TTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGT 102087 || | ||||||||||| || ||| || |||||| | || || | | | Sbjct 1768244 CTCCCGTGACGAAGGTCTCCACACCGATTTCGCATGCCTCCTCTTCTCCCA---TCTCAA 1768300 Query 102088 TGATACCCCATCAAGAGAAAG-GATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAAC 102146 | |||||| | || ||| | | || | |||| || |||||| ||| || | Sbjct 1768301 GCACCGCCCATCCA-AGCAAGCTGTCCAAGACGTCATCACCGAGGCCGTCGCAATCGAGC 1768359 Query 102147 AAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGA 102206 ||||||| | || | | || ||| | | | || ||||||| || | |||| Sbjct 1768360 AAGAATTCTTGACCGAGGCTCTTCCTTGTGCTCTTCTAGGCATGAACTCCACCCTCATGA 1768419 Query 102207 GCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACT 102266 |||||||| ||||| || || ||| || | | | |||| || || || Sbjct 1768420 AGCAGTACATCGAATTCGTTGCTGATCGTCTCCTCATCGCTTTGGGCAACGACAAAGTCT 1768479 Query 102267 ATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACT 102326 | || | |||| || || |||||||| ||||||||| | | ||||| |||| Sbjct 1768480 ACAAATCTGCCAATCCATTTGACTTCATGGAGAATATTTCCTTGGCCGGCAAGACTAACT 1768539 Query 102327 TTTTTGAAAAGAGAGTCGCCGAGTATCAACGTGCCCAGGTCATGGCTTCTATCAATAAGA 102386 |||| ||||||||||| | || || ||| ||| ||||||||| || | | |||| Sbjct 1768540 TTTTCGAAAAGAGAGTTGGTGATTACCAAAAGGCCGGTGTCATGGCTGGTACCCAAAAGA 1768599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989579308753350