Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq4 215 6e-51 seq7 154 2e-32 >seq4 Length=2560074 Score = 215 bits (238), Expect = 6e-51 Identities = 1303/2067 (63%), Gaps = 53/2067 (3%) Strand=Plus/Plus Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105 ||||||||||| || || || || | | ||||||| |||||||||||| || || | | Sbjct 939887 GTGAATTGAATAGGTGCTGAGGCAGCCATAGTACGTAAATAGTACATTCCGGTCTTCAAA 939946 Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62165 || | |||| || ||||||||| || | ||| | ||||| || Sbjct 939947 CCCAATTTCCAACCAGCAAAATGCATGGATGTAATCTTGCCCATTGTAGGATCCTTCATG 940006 Query 62166 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62225 || || ||||| |||||| |||||||||||| || || | || |||||||||| | Sbjct 940007 TGAATGTTCATTGATTGAGATTGATCGATGAATGCACCACGATCAGCAGCCATTTGAACA 940066 Query 62226 ATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62285 || || ||| | |||||||||| ||| || |||| ||| || || |||||| Sbjct 940067 ATTGTTCGTTGAGAGATTTCCCAAACAGTCTTGTAAAGAGCCTTGATGTCAGCTGGAATA 940126 Query 62286 TTTG---TATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 62342 || | |||| ||||||||||||||||| | || || | ||||| || | ||| | Sbjct 940127 TTGGGGATATTTTGAATGGATCCACCATCAGCAATGATACGGTTCTTCATATTGTCAGAC 940186 Query 62343 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCA 62402 || | | ||| | | | || || |||||||| |||||||||||||| Sbjct 940187 CAGAGACCCATATCGACAAGGTCCTTGAGAAGCCATGGGTTAACGACTTGGAATTCTCCG 940246 Query 62403 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCC 62462 | | || | |||| ||| || || || || || || | | || || || Sbjct 940247 GCAAGAACACGACGAGAGTAGATGTTTGAAGTGTAAGGCTCGAAACATTCGTTGAAGCCA 940306 Query 62463 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 62522 | |||||| | || ||||| ||||||||||| || | | | || | | ||| Sbjct 940307 AGAATTTGGGATGTGCTAGCAGTAGGCATAGGTGCAACTAGGAGAGAGTTGCGGATTCCG 940366 Query 62523 TATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAACANNN 62582 | | |||| | || | | ||||||| ||| | ||| | ||| ||| Sbjct 940367 TGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCAGTAGGTGTAACCCCC 940426 Query 62583 NNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCATATGGT 62642 ||||| || ||| ||| | | || ||| ||| || || ||||| Sbjct 940427 CACATATCGTATTGAAGTTCACCCTTAGAGACTGGGGAGCCTTGATAGGTTTCGTATGGG 940486 Query 62643 CC---TTCCTTCTC-AGCTAGTTTAC--AACTCGCCTCTAATGCACCGTAATAAATGGTT 62696 || |||||| | | || | || || | | || ||| ||| || ||||| Sbjct 940487 CCAAGTTCCTTTGCGATCTCG---ACGGAAGAGGTC---AAGGCAGCGTGGTAGATGGTC 940540 Query 62697 TCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAG- 62755 || || || | | || || | || ||||| ||| ||||||||| | ||||| Sbjct 940541 TCGAAAATTTGTATGTTGAGGTGTTTGGCTTCTGGGGAGTCAAATGGAAGACG-AAGAGC 940599 Query 62756 -AATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAG 62814 || ||| || || || | ||||||||||| | ||||||||| ||| | ||| | Sbjct 940600 CAAGAAA-GCATCAGCAAGACCTTGAACACCGACCGCGATAGGTCGATGACGGAAATT-G 940657 Query 62815 AGATTTCAG-CTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG 62873 |||| | | |||| | ||||| || || || || ||||| ||||| | ||||| Sbjct 940658 CTTTTTCGGGCCTCTGCGACTGGATAGTAGTTGATGTCAATAATCTTATTCAAGTTTCTA 940717 Query 62874 ACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---TCGCCCATCTATT--- 62927 |||| |||| ||| || || | || || | |||||| | || | ||| || Sbjct 940718 ACAACAACTTGGACAACCTCGTGAAGCTTTTGGAAATCATAAGTTCCCTCATTCATGTTG 940777 Query 62928 AC-AAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGC 62986 || ||| || | || || | || |||| ||||| || ||||||| | | | Sbjct 940778 ACGAAAGTTGGTAAA-GCGATGGAAGCCAAGTTACAGCAAGCAACCTCATCTGGTGCAGA 940836 Query 62987 ATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATT 63046 || | | || || ||||| | ||| | ||||| || | || | ||| || Sbjct 940837 GTACTCGACGATTTCCGTGCACAAATTGGAGCTGCGAATAGTACCCAGGTTCTTTTGGTT 940896 Query 63047 ACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGA 63106 ||||| ||||| || |||||||| ||||| ||||| ||| | || || || | |||| Sbjct 940897 GCTCTTCTTGTTGCATGCATCCTTGTAAAGCATGAAAGGATTTCCGGTCTCGGTTTGAGC 940956 Query 63107 TTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTC- 63165 || | ||| | | ||| | | ||||||| || || ||| | | | || Sbjct 940957 CTCAAGAATGGAGTACCAAAGTTTTTGAGCCTTGAT---AGTCTTGCGACCCTTGCCTGC 941013 Query 63166 --TTTCGTATAGA--GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTA 63221 ||||||| ||| | | | |||||||| || || |||||| | || | Sbjct 941014 CTTTTCGTAACCCTCGTAGAGAGCC--TCGAACTCCTCGCCATAAACATCTGCTAAACCT 941071 Query 63222 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 63281 |||||||| | || ||||| | | ||| ||||| | | | || || ||||| || Sbjct 941072 GGACATTCGTTGGGGCACATGAGAGTCCAATCTCCATTCTTTTCAACACGCTTCATGAAT 941131 Query 63282 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTA 63341 |||||||||||||| | || || ||||| | || | | ||| || || || | Sbjct 941132 AGATCAGGAATCCACAAGGCGTAGAAGAGATCGCGTGCACGAACTTCTTCCTTGCCATGA 941191 Query 63342 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 63401 || || ||||| |||||| | | || ||| | |||||| || || | ||| | || Sbjct 941192 TTTTTGCGTAGATCAAGGAACTCAAAAACATCCGCATGCCATGGCTCAAGGTAAACAGCA 941251 Query 63402 ATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 63461 | | ||||| || || || || || ||||| | ||||| || ||||| || ||||| Sbjct 941252 AAGGCACCAGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAAACT 941311 Query 63462 CTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTG 63521 | | ||| |||| || ||||| || | ||||||||||||| || || | ||| | Sbjct 941312 CGGAGCATAGGAACGATGCCGTTAGAGTTTCCATTGGTACCGGCTATGTATGCGCCAGTA 941371 Query 63522 GCACGAAT---ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 63578 ||||| || | | | |||| ||||| || || || || | || ||||| | || Sbjct 941372 GCACGGATTCGGTGAAT-ATTG--AGACCAATACCACCAGCATTCTTTGAGATCATAGCA 941428 Query 63579 CATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAA 63638 || || || || || || || || || || || || || |||||| | || || Sbjct 941429 CAAATCTTCAAAGTATCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATAAGGAAG 941488 Query 63639 CAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 63698 || || | ||| | | ||| |||||| || | || || || || || || Sbjct 941489 CATGATGAAAGTTGTGCTTGTGGAGTACCCGCAGAGAAGAGTGTTGGCGAGGCATGTGTG 941548 Query 63699 AACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATG 63757 || | || | || | | ||||| || || || || || || || || | || Sbjct 941549 AAGTACTTGTTTGACATCAAGTTGTATGTTTCGATGGCACTTTCAATGTCATCACCG-TG 941607 Query 63758 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTAT 63817 ||| || || || |||||||| | ||| || || || | ||| ||| |||| | | Sbjct 941608 AATACCAACGGCAACACGCATGATCATTTGTTGTGGACGTTCTGCAACTTTGCCATCAAG 941667 Query 63818 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCT 63875 | | ||| ||| || | ||| || || ||||| || | || ||||| ||| Sbjct 941668 ACGTAGAAGGTATGATCGCTCGAGAGTCTTGAATCCAAAGTATTGATAGTTGAAA--TCT 941725 Query 63876 CGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTA 63935 || ||||| | ||| | ||||| || | |||| || | | |||| || | || Sbjct 941726 CGGTCGTAGACAATGGCAGAATTAAGTTCCTCCTCATGTCTCATAACACATTCGAAAGT- 941784 Query 63936 ATACTTG-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATC 63994 | |||| ||| || ||||| | | |||||| | || || ||| | | ||||||| Sbjct 941785 TTCCTTGCTAATCATAGGAGATGCTGTGCCATTTCTTGGGTTTGTATATTGGTATAAATC 941844 Query 63995 CTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCT 64054 || || | || ||||||| |||| ||||| || || || | || || | Sbjct 941845 GCGAATAACGTGCGAGAACTGTTTTTTGGTTTGTTTGTGAAGGTTGGAGACTGCAATACG 941904 Query 64055 GGCGGCTAGAATGGCATAATCCGGATG 64081 || ||||||||||||||||| ||||| Sbjct 941905 AGCAGCTAGAATGGCATAATCGGGATG 941931 >seq7 Length=2023280 Score = 154 bits (170), Expect = 2e-32 Identities = 344/513 (67%), Gaps = 5/513 (1%) Strand=Plus/Minus Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350 |||||||| ||||| || | ||||||||||| ||||| || || |||| || ||||| Sbjct 1768570 TTTTGGTAATCACCAACTCTCTTTTCGAAAAAGTTAGTCTTGCCGGCCAAGGAAATATTC 1768511 Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410 |||||||| ||||| ||||||| | ||||| | ||| | ||||| | | Sbjct 1768510 TCCATGAAGTCAAATGGATTGGCAGATTTGTAGACTTTGTCGTTGCCCAAAGCGATGAGG 1768451 Query 33411 AATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGT 33470 | | ||| || |||||||| || || ||||| | | ||||| |||| || Sbjct 1768450 AGACGATCAGCAACGAATTCGATGTACTGCTTCATGAGGGTGGAGTTCATGCCTAGAAGA 1768391 Query 33471 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATA 33530 | ||||||||| | || | |||||||| || || | || || | || || | Sbjct 1768390 GCACAAGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTGCGACGGCCTCGGTGATGACG 1768331 Query 33531 AATCTAACGGTTT-CTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAA 33589 | || | || ||| | || || || | ||| || | | |||||||| Sbjct 1768330 TCTTGGACAGCTTGCTTGGATGGGCGG-TGCTTGAGATGGGAGAAGAGGAGGCATGCGAA 1768272 Query 33590 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCAT 33649 |||| ||| ||||| ||||| | || | |||||| ||||| |||||||||| ||| Sbjct 1768271 ATCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTTGAAAAGGTGAGTCCGGCCAT 1768212 Query 33650 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTC 33709 || |||||||| || ||||| || || || ||||| |||||||| || ||||| ||||| Sbjct 1768211 GAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAAAAGATACCTTC 1768152 Query 33710 TACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG---CTGTCATGTATCCACTT 33766 || ||||| || || | ||| | | || | || | | || || ||||| || Sbjct 1768151 AACGGCAGCGAATGCGACAAGACGTTGAGCAAAGGTGGAGTTCTTATCTTGAATCCATTT 1768092 Query 33767 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 33799 |||||| ||||||||||| || | ||||| Sbjct 1768091 GACAGCCCAGTCGGCCTTCTTCTTGATGCAAGG 1768059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629814687093600