Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq4 147 2e-30 >seq4 Length=2560074 Score = 147 bits (162), Expect = 2e-30 Identities = 397/600 (66%), Gaps = 12/600 (2%) Strand=Plus/Plus Query 37957 ACATCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCT 38016 ||||| ||| |||||||||||| || ||||| |||| ||| ||| ||| ||||| Sbjct 941057 ACATCTGCTAAACCTGGACATTCGTTGGGGCACATGAGAGTCCAATCTCCATTCTTTTCA 941116 Query 38017 ACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTA-AATAAATCTTTGGTTCTATA 38075 || || | ||| |||| |||||| | ||| || || ||| || | ||| | | | Sbjct 941117 ACACGCTTCATGAATAGATCAGGAATCCACAAGGC-GTAGAAGAGATCGCGTGCACGAAC 941175 Query 38076 TTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGG 38135 |||||| || || ||| || | || || || || || | ||| || |||||||| Sbjct 941176 TTCTTCCTTGCCATGATTTTTGCGTAGATCAAGGAACTCAAAAACATCCGCATGCCATGG 941235 Query 38136 TTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAAC 38195 || | |||| | | || || || | |||| ||| || |||| || |||||| | Sbjct 941236 CTCAAGGTAAACAGCAAAGGCACCAGGACGCTTATTACCACCTTGATCAACATATCTGGC 941295 Query 38196 TGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGA 38255 ||||| || | | || | |||||| || || || ||||| || || || |||||| Sbjct 941296 AGTGTTGTTGAAAACTCGGAGCATAGGAACGATGCCGTTAGAGTTTCCATTGGTACCGGC 941355 Query 38256 TATATAAGTACCCTTAGCTCGTAT--ATTACTTATCGACAATCCTATTCCACCTGCATGT 38313 ||| || | || |||| || || | ||| || | || || ||||| |||| Sbjct 941356 TATGTATGCGCCAGTAGCACGGATTCGGTGAATATTGAGA--CCAATACCACCAGCATTC 941413 Query 38314 TTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTT 38373 ||||| || | ||| || || || ||||| | ||||| || |||||||| ||||| Sbjct 941414 TTTGAGATCATAGCACAAATCTTCAAAGTATCGTAAATACCATCAATACTGTCCTCCTTC 941473 Query 38374 ATTGGTAGTATA---AAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAAT 38430 || || | ||| || || || | ||| | |||||| || || || | | Sbjct 941474 AT--GTCG-ATAAGGAAGCATGATGAAAGTTGTGCTTGTGGAGTACCCGCAGAGAAGAGT 941530 Query 38431 GTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCA 38490 || || || |||||| |||| | || | |||| | || |||||||| || || Sbjct 941531 GTTGGCGAGGCATGTGTGAAGTACTTGTTTGACATCAAGTTGTATGTTTCGATGGCACTT 941590 Query 38491 TCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCT 38550 || || ||| | ||||||||||| | | || | ||| | ||| |||||||| | |||| Sbjct 941591 TCAATGTCATCACCGTGAATACCAACGGCAACACGCATGATCATTTGTTGTGGACGTTCT 941650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468522633072800