Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq4 215 7e-51 seq7 132 6e-26 >seq4 Length=2560074 Score = 215 bits (238), Expect = 7e-51 Identities = 1303/2066 (63%), Gaps = 51/2066 (2%) Strand=Plus/Plus Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898 ||||||||||| || || || || | | ||||||| |||||||||||| || || | | Sbjct 939887 GTGAATTGAATAGGTGCTGAGGCAGCCATAGTACGTAAATAGTACATTCCGGTCTTCAAA 939946 Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 64958 || | |||| || ||||||||| || | ||| | ||||| || Sbjct 939947 CCCAATTTCCAACCAGCAAAATGCATGGATGTAATCTTGCCCATTGTAGGATCCTTCATG 940006 Query 64959 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 65018 || || ||||| |||||| |||||||||||| || || | || |||||||||| | Sbjct 940007 TGAATGTTCATTGATTGAGATTGATCGATGAATGCACCACGATCAGCAGCCATTTGAACA 940066 Query 65019 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 65078 || || ||| | |||||||||| ||| || |||| ||| || || |||||| Sbjct 940067 ATTGTTCGTTGAGAGATTTCCCAAACAGTCTTGTAAAGAGCCTTGATGTCAGCTGGAATA 940126 Query 65079 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 65135 || | |||| ||||||||||||||||| || || || | ||||| || | ||| | Sbjct 940127 TTGGGGATATTTTGAATGGATCCACCATCAGCAATGATACGGTTCTTCATATTGTCAGAC 940186 Query 65136 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 65195 || | | ||| | | | || || || ||||| ||||| |||||||| Sbjct 940187 CAGAGACCCATATCGACAAGGTCCTTGAGAAGCCATGGGTTAACGACTTGGAATTCTCCG 940246 Query 65196 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 65255 | | || | |||| ||| || || || || || || | | | || || || Sbjct 940247 GCAAGAACACGACGAGAGTAGATGTTTGAAGTGTAAGGCTCGAAACATTCGTTGAAGCCA 940306 Query 65256 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 65315 | |||||| | || ||||| ||||||||||| || | | | || | | ||| Sbjct 940307 AGAATTTGGGATGTGCTAGCAGTAGGCATAGGTGCAACTAGGAGAGAGTTGCGGATTCCG 940366 Query 65316 TATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNN 65375 | | |||| | || | || ||||||| ||| | ||| | ||| ||| Sbjct 940367 TGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCAGTAGGTGTAACCCCC 940426 Query 65376 NNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGT 65435 ||| || ||| ||| | | || ||| ||| || |||||||| Sbjct 940427 CACATATCGTATTGAAGTTCACCCTTAGAGACTGGGGAGCCTTGATAGGTTTCGTATGGG 940486 Query 65436 CC---TTCCTTCTC-AGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTC 65491 || |||||| | | || | | || | | || ||| ||| || ||||| || Sbjct 940487 CCAAGTTCCTTTGCGATCTCG-ACGGAAGAGGTC---AAGGCAGCGTGGTAGATGGTCTC 940542 Query 65492 GAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAG--A 65549 ||| || | | || || | || ||||| || ||||||||| | ||||| | Sbjct 940543 GAAAATTTGTATGTTGAGGTGTTTGGCTTCTGGGGAGTCAAATGGA-AGACGAAGAGCCA 940601 Query 65550 ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 65609 | ||| || || || | ||||||||||| | ||||||||| ||| | ||| | Sbjct 940602 AGAAA-GCATCAGCAAGACCTTGAACACCGACCGCGATAGGTCGATGACGGAAATT-GCT 940659 Query 65610 ATTTC-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGAC 65668 |||| || |||| | ||||| || || || || ||||| ||||| | ||||| || Sbjct 940660 TTTTCGGGCCTCTGCGACTGGATAGTAGTTGATGTCAATAATCTTATTCAAGTTTCTAAC 940719 Query 65669 AATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---TCGCTCATCTA---TTAC 65722 || |||| ||| || || | || || | |||||| | || ||||| | | || Sbjct 940720 AACAACTTGGACAACCTCGTGAAGCTTTTGGAAATCATAAGTTCCCTCATTCATGTTGAC 940779 Query 65723 -AAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCAT 65781 ||| || | || || | || |||| ||||| || ||||||| | | | | Sbjct 940780 GAAAGTTGGT-AAAGCGATGGAAGCCAAGTTACAGCAAGCAACCTCATCTGGTGCAGAGT 940838 Query 65782 ATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTAC 65841 | | | || || ||||| | ||| | || || || | || | ||| || | Sbjct 940839 ACTCGACGATTTCCGTGCACAAATTGGAGCTGCGAATAGTACCCAGGTTCTTTTGGTTGC 940898 Query 65842 TCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATT 65901 |||| ||||| || |||||||| ||||| ||||| ||| | || || || | |||| | Sbjct 940899 TCTTCTTGTTGCATGCATCCTTGTAAAGCATGAAAGGATTTCCGGTCTCGGTTTGAGCCT 940958 Query 65902 CTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTT---TTCTC 65958 | | ||| | | ||| | | |||||| | |||| ||| | ||| | | Sbjct 940959 CAAGAATGGAGTACCAAAGTTTTTGAGCCT---TGATAGTCTTGCGACCCTTGCCTGCCT 941015 Query 65959 TTTCGTA--TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGG 66016 ||||||| ||| | | | |||||||| || || |||||| | || || || Sbjct 941016 TTTCGTAACCCTCGTAGAGAGCC--TCGAACTCCTCGCCATAAACATCTGCTAAACCTGG 941073 Query 66017 ACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAG 66076 |||||| | || ||||| | | ||| ||||| | | | || || ||||| || || Sbjct 941074 ACATTCGTTGGGGCACATGAGAGTCCAATCTCCATTCTTTTCAACACGCTTCATGAATAG 941133 Query 66077 ATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATT 66136 |||||||||||| | || || | ||| | | | | ||| || || || ||| Sbjct 941134 ATCAGGAATCCACAAGGCGTAGAAGAGATCGCGTGCACGAACTTCTTCCTTGCCATGATT 941193 Query 66137 CTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCAT 66196 || ||||| |||||| | | || ||| |||||| || || | ||| | || | Sbjct 941194 TTTGCGTAGATCAAGGAACTCAAAAACATCCGCATGCCATGGCTCAAGGTAAACAGCAAA 941253 Query 66197 AACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 66256 | ||||| || || || || || ||||| | ||||| || ||||| || |||||| Sbjct 941254 GGCACCAGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAAACTCG 941313 Query 66257 CAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGC 66316 | ||| |||| || || || || | |||||||| |||| || || ||| | || Sbjct 941314 GAGCATAGGAACGATGCCGTTAGAGTTTCCATTGGTACCGGCTATGTATGCGCCAGTAGC 941373 Query 66317 ACGAAT---ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 66373 ||| || | | | |||| ||||| || || || || | || ||||| | || || Sbjct 941374 ACGGATTCGGTGAAT-ATTG--AGACCAATACCACCAGCATTCTTTGAGATCATAGCACA 941430 Query 66374 TCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACA 66433 || || ||||| || || || || ||||| || ||| |||||| | || || || Sbjct 941431 AATCTTCAAAGTATCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATAAGGAAGCA 941490 Query 66434 GCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAA 66493 || | ||| | ||| |||||| || | || || || || || || || Sbjct 941491 TGATGAAAGTTGTGCTTGTGGAGTACCCGCAGAGAAGAGTGTTGGCGAGGCATGTGTGAA 941550 Query 66494 CCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAA 66552 | || | || | | ||||| || || || || || || || || | |||| Sbjct 941551 GTACTTGTTTGACATCAAGTTGTATGTTTCGATGGCACTTTCAATGTCATCACCG-TGAA 941609 Query 66553 TTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTT 66612 | || || || |||||||| | ||| || || || | ||| | | ||| | | Sbjct 941610 TACCAACGGCAACACGCATGATCATTTGTTGTGGACGTTCTGCAACTTTGCCATCAAGAC 941669 Query 66613 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCG 66670 | | ||| ||| || | ||| || || ||||| || | || ||||| ||||| Sbjct 941670 GTAGAAGGTATGATCGCTCGAGAGTCTTGAATCCAAAGTATTGATAGTTGAAA--TCTCG 941727 Query 66671 TTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACA-TCCATGGTAA 66729 ||||| | ||| | || || |||| |||| || | | |||| ||| || | || Sbjct 941728 GTCGTAGACAATGGCAGAATTAAGTTCCTCCTCATGTCTCATAAC-ACATTCGAAAGT-T 941785 Query 66730 TACTTG-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCC 66788 | |||| ||| || ||||| | | |||||| | || || ||| | | ||||||| Sbjct 941786 TCCTTGCTAATCATAGGAGATGCTGTGCCATTTCTTGGGTTTGTATATTGGTATAAATCG 941845 Query 66789 TCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTA 66848 || || | || ||||||| |||| |||||| || || || || || || | | Sbjct 941846 CGAATAACGTGCGAGAACTGTTTTTTGGTTTGTTTGTGAAGGTTGGAGACTGCAATACGA 941905 Query 66849 GCGGCTATAATGGCATAATCCGGATG 66874 || |||| |||||||||||| ||||| Sbjct 941906 GCAGCTAGAATGGCATAATCGGGATG 941931 >seq7 Length=2023280 Score = 132 bits (146), Expect = 6e-26 Identities = 566/902 (63%), Gaps = 63/902 (7%) Strand=Plus/Minus Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926 |||||||| ||||| || | ||||||||||| ||||| || || | || || ||||| Sbjct 1768570 TTTTGGTAATCACCAACTCTCTTTTCGAAAAAGTTAGTCTTGCCGGCCAAGGAAATATTC 1768511 Query 35927 TCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATC 35986 |||||||| || ||||||||| | || || | ||| | ||||| | | Sbjct 1768510 TCCATGAAGTCAAATGGATTGGCAGATTTGTAGACTTTGTCGTTGCCCAAAGCGATGAGG 1768451 Query 35987 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 36046 | | ||| || || ||||| || || ||||| | | ||||| |||| ||| Sbjct 1768450 AGACGATCAGCAACGAATTCGATGTACTGCTTCATGAGGGTGGAGTTCATGCCTAGAAGA 1768391 Query 36047 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 36106 | ||||||||| | || | |||||||| || || | ||| || || || || | Sbjct 1768390 GCACAAGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTGCGACGGCCTCGGTGATGACG 1768331 Query 36107 GATATTACTGTTT-CTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAA 36165 | || | || ||| | || || | | | ||| || | | |||||||| Sbjct 1768330 TCTTGGACAGCTTGCTTGGATGGGCGG-TGCTTGAGATGGGAGAAGAGGAGGCATGCGAA 1768272 Query 36166 ATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCAT 36225 |||| ||| ||||| ||||| | || | |||||| ||||| |||||||||| ||| Sbjct 1768271 ATCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTTGAAAAGGTGAGTCCGGCCAT 1768212 Query 36226 TAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTC 36285 || |||||||| || ||||| || || || || || ||||| || || || || ||||| Sbjct 1768211 GAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAAAAGATACCTTC 1768152 Query 36286 TACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGTATCCACTT 36342 || || || || || | ||| | | || | || | || || ||||| || Sbjct 1768151 AACGGCAGCGAATGCGACAAGACGTTGAGCAAAGGTGGAGTTCTTATCTTGAATCCATTT 1768092 Query 36343 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA------------------------- 36377 |||||| ||||||||||| || | ||||| | Sbjct 1768091 GACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGAACTATCAAGCTTGTTAGTTGAATTCA 1768032 Query 36378 --------------------------TTGTCTCTATAGCATTAAAGAGATA-Gt-ttttt 36409 | || || |||||||| ||||| || || |||| Sbjct 1768031 CGTAACAATATATGATTATCACCTACTGGTATCAATAGCATTGAAGAGGTATGTCTTTTG 1767972 Query 36410 tCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTT 36469 | || | || || | |||||| || || | |||| || |||| || |||||||| Sbjct 1767971 TGCTTGC--TCCTTGATATATGTGTCGATGAGAAGAGAGTATGTTTCGGAGTGAATGTTC 1767914 Query 36470 TCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAA 36529 || || ||||| || |||||||| |||| ||||| | || || ||||| || Sbjct 1767913 TCCATCATGATTTGGAAACCGTAGAAGCATCGTGCCTCTGGGATTTGAACTTCACCACTG 1767854 Query 36530 AATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACA 36589 ||||| || | || || || || || |||||||| || || || || || | || Sbjct 1767853 AATCGCTCAACCAAGTTCTCGTTGACAATTCCGTCTGATGCGGCGAAGAATGCGAGAACG 1767794 Query 36590 TGTTTTATAAAATATTTTTCGTTTGGTGTTAGT---TTATTCCAATCATTGATATCTTTA 36646 || || || || |||| | ||| || ||||| || | || ||| || Sbjct 1767793 TGGGAGATGAAGTAACGCTCGTCATCATTGAGTCTGTTGTTCCAGTCGTGGAGATCCTTT 1767734 Query 36647 GATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAG 36706 || | ||| | ||||| | ||||| || ||||||||||||||||| ||||| | |||| Sbjct 1767733 GACAAATCAATCTCTTCTGCGGTCCAGAAAGATGCCTCTGCCTTTTTGTACATCTGCCAG 1767674 Query 36707 AT 36708 || Sbjct 1767673 AT 1767672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658169755950800