Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq4 257 2e-63 seq7 154 2e-32 >seq4 Length=2560074 Score = 257 bits (284), Expect = 2e-63 Identities = 1319/2070 (64%), Gaps = 59/2070 (3%) Strand=Plus/Plus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 ||||||||||| || || || || | | ||||||| |||||||||||| || || | | Sbjct 939887 GTGAATTGAATAGGTGCTGAGGCAGCCATAGTACGTAAATAGTACATTCCGGTCTTCAAA 939946 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 || | |||| || |||||||| || | ||| | ||||| || Sbjct 939947 CCCAATTTCCAACCAGCAAAATGCATGGATGTAATCTTGCCCATTGTAGGATCCTTCATG 940006 Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897 || || ||||| |||||| |||||||||||| || || | || |||||||||| | Sbjct 940007 TGAATGTTCATTGATTGAGATTGATCGATGAATGCACCACGATCAGCAGCCATTTGAACA 940066 Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 78957 || || ||| | |||||||||| ||| || |||| ||| || || |||||| Sbjct 940067 ATTGTTCGTTGAGAGATTTCCCAAACAGTCTTGTAAAGAGCCTTGATGTCAGCTGGAATA 940126 Query 78958 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTC 79014 || | |||| ||||||||||||||||| || || || | ||||| || | ||| | Sbjct 940127 TTGGGGATATTTTGAATGGATCCACCATCAGCAATGATACGGTTCTTCATATTGTCAGAC 940186 Query 79015 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 79074 || | | ||| | | | || || || ||||| ||||| |||||||| Sbjct 940187 CAGAGACCCATATCGACAAGGTCCTTGAGAAGCCATGGGTTAACGACTTGGAATTCTCCG 940246 Query 79075 GACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCC 79134 | | || | |||| ||| || || || || || || | |||| || || Sbjct 940247 GCAAGAACACGACGAGAGTAGATGTTTGAAGTGTAAGGCTCGAAACATTCGTTGAAGCCA 940306 Query 79135 AAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 79194 | |||||| | || || || ||||||||||| || | | | || | | ||| Sbjct 940307 AGAATTTGGGATGTGCTAGCAGTAGGCATAGGTGCAACTAGGAGAGAGTTGCGGATTCCG 940366 Query 79195 TATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTC 79254 | | |||| | || | ||| ||||||||||| | ||||| || ||| | Sbjct 940367 TGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCAGTAGGTGTAACCCCC 940426 Query 79255 CAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGT 79314 || | ||| ||||| || ||| ||| | || ||| || ||||| || || Sbjct 940427 CACATATCGTATTGAAGTTCACCCTTAGAGACTGGGGAGCCTTGATAGGTTTCGTATGGG 940486 Query 79315 CC---TTCCTTTTCGGCTAATTC-AC--AACTCGCCTCTAATGCTCCGTAATAAATGGTT 79368 || ||||||| || | || || || | | || || ||| || ||||| Sbjct 940487 CCAAGTTCCTTTGCG---ATCTCGACGGAAGAGGTC---AAGGCAGCGTGGTAGATGGTC 940540 Query 79369 TCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAG- 79427 |||||||| | | ||||| | || |||||| || ||||||||| | ||||| Sbjct 940541 TCGAAAATTTGTATGTTGAGGTGTTTGGCTTCTGGGGAGTCAAATGGAAGACG-AAGAGC 940599 Query 79428 -AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAG 79486 || ||| || || || | ||||||||||| | ||||||||| ||| | ||| | Sbjct 940600 CAAGAAA-GCATCAGCAAGACCTTGAACACCGACCGCGATAGGTCGATGACGGAAATT-G 940657 Query 79487 AAATTTCAG-CTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTG 79545 |||| | | |||| | ||||| || || || || ||||| ||||| | || || Sbjct 940658 CTTTTTCGGGCCTCTGCGACTGGATAGTAGTTGATGTCAATAATCTTATTCAAGTTTCTA 940717 Query 79546 ACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCCATC-----TATT- 79599 || | |||| ||| || || | || || | |||||| | ||| || | || Sbjct 940718 ACAACAACTTGGACAACCTCGTGAAGCTTTTGGAAATCATAAGTTCCCTCATTCATGTTG 940777 Query 79600 AC-AAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGC 79658 || ||| || | || |||| || |||| ||||| || ||||||| | | | Sbjct 940778 ACGAAAGTTGGTAAA-GCGATGGAAGCCAAGTTACAGCAAGCAACCTCATCTGGTGCAGA 940836 Query 79659 ATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATT 79718 || | | ||||| ||||| | || | ||| || || | || | ||| || Sbjct 940837 GTACTCGACGATTTCCGTGCACAAATTGGAGCTGCGAATAGTACCCAGGTTCTTTTGGTT 940896 Query 79719 ACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGA 79778 ||||| ||||| || |||||||| ||||| ||||| ||| | || || || | |||| Sbjct 940897 GCTCTTCTTGTTGCATGCATCCTTGTAAAGCATGAAAGGATTTCCGGTCTCGGTTTGAGC 940956 Query 79779 TTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTC- 79837 || | ||| | | ||| | | ||||||| || || |||| | ||| || Sbjct 940957 CTCAAGAATGGAGTACCAAAGTTTTTGAGCCTTGAT---AGTCTTGCGACCCTTGCCTGC 941013 Query 79838 --TTTCGTATTGT--GTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCA 79893 ||||||| ||| | | | |||||||| || || ||||||| |||| || Sbjct 941014 CTTTTCGTAACCCTCGTAGAGAGCC--TCGAACTCCTCGCCATAAACATCTGCTAAACCT 941071 Query 79894 GGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTT--ACTCGTTTCATAA 79951 |||||||||| || ||||| | | ||| ||||||| || ||| || || ||||| | Sbjct 941072 GGACATTCGTTGGGGCACATGAGAGTCCAATCTCCAT--TCTTTTCAACACGCTTCATGA 941129 Query 79952 AGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTG 80011 | |||||||||||||| | || || ||||| | | | | || || || || Sbjct 941130 ATAGATCAGGAATCCACAAGGCGTAGAAGAGATCGCGTGCACGAACTTCTTCCTTGCCAT 941189 Query 80012 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 80071 ||| || ||||| |||||| | | || ||| | |||||| || || | ||| | | Sbjct 941190 GATTTTTGCGTAGATCAAGGAACTCAAAAACATCCGCATGCCATGGCTCAAGGTAAACAG 941249 Query 80072 CCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 80131 | | | || || || || || || || ||||| | ||||| || ||||| || ||| Sbjct 941250 CAAAGGCACCAGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAAA 941309 Query 80132 CTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCAC 80191 ||| | ||| |||| || || || || | |||||||| |||| || || ||| Sbjct 941310 CTCGGAGCATAGGAACGATGCCGTTAGAGTTTCCATTGGTACCGGCTATGTATGCGCCAG 941369 Query 80192 TGGCACGAAT---ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 80248 | ||||| || | | | |||| ||||| || || || || | || ||||| | | Sbjct 941370 TAGCACGGATTCGGTGAAT-ATTG--AGACCAATACCACCAGCATTCTTTGAGATCATAG 941426 Query 80249 CGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAA 80308 | || || || ||||| || || || || || || || || |||||| | || | Sbjct 941427 CACAAATCTTCAAAGTATCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATAAGGA 941486 Query 80309 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 80368 | || || | ||| | ||| |||||| || | || || || || || | Sbjct 941487 AGCATGATGAAAGTTGTGCTTGTGGAGTACCCGCAGAGAAGAGTGTTGGCGAGGCATGTG 941546 Query 80369 TAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGA 80427 | || | || | |||| | ||||| || || || || ||| || || || | Sbjct 941547 TGAAGTACTTGTTTGACATCAAGTTGTATGTTTCGATGGCACTTTCAATGTCATCACCG- 941605 Query 80428 TGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTT 80487 ||||| || || || |||||||| | ||| || || || | ||| | | ||| || Sbjct 941606 TGAATACCAACGGCAACACGCATGATCATTTGTTGTGGACGTTCTGCAACTTTGCCATCA 941665 Query 80488 ATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGT 80545 | | | ||| ||| || | ||| || || ||||| || | || ||||| | Sbjct 941666 AGACGTAGAAGGTATGATCGCTCGAGAGTCTTGAATCCAAAGTATTGATAGTTGAAA--T 941723 Query 80546 CTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACA-TCCATG 80604 |||| ||||| | ||| | || || |||| |||| || | | |||| ||| || | Sbjct 941724 CTCGGTCGTAGACAATGGCAGAATTAAGTTCCTCCTCATGTCTCATAAC-ACATTCGAAA 941782 Query 80605 GTGATACTTG-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAA 80663 || | |||| ||| || ||||| | | |||||| | || || ||| | | |||| Sbjct 941783 GT-TTCCTTGCTAATCATAGGAGATGCTGTGCCATTTCTTGGGTTTGTATATTGGTATAA 941841 Query 80664 ATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTAT 80723 ||| || || | || ||||||| |||| ||||| || || || || || || Sbjct 941842 ATCGCGAATAACGTGCGAGAACTGTTTTTTGGTTTGTTTGTGAAGGTTGGAGACTGCAAT 941901 Query 80724 TCTGGCGGCTAAAATGGCATAATCTGGATG 80753 | || |||| |||||||||||| ||||| Sbjct 941902 ACGAGCAGCTAGAATGGCATAATCGGGATG 941931 >seq7 Length=2023280 Score = 154 bits (170), Expect = 2e-32 Identities = 344/513 (67%), Gaps = 5/513 (1%) Strand=Plus/Minus Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728 |||||||| ||||| || | ||||||||||| ||||| || || |||| || ||||| Sbjct 1768570 TTTTGGTAATCACCAACTCTCTTTTCGAAAAAGTTAGTCTTGCCGGCCAAGGAAATATTC 1768511 Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788 |||||||| ||||| ||||||| | || || | ||| | ||||| | | Sbjct 1768510 TCCATGAAGTCAAATGGATTGGCAGATTTGTAGACTTTGTCGTTGCCCAAAGCGATGAGG 1768451 Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 49848 | | ||| || || ||||| || || ||||| | | ||||| |||| ||| Sbjct 1768450 AGACGATCAGCAACGAATTCGATGTACTGCTTCATGAGGGTGGAGTTCATGCCTAGAAGA 1768391 Query 49849 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 49908 | ||||||||| | || | |||||||| || || | || || || || || | Sbjct 1768390 GCACAAGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTGCGACGGCCTCGGTGATGACG 1768331 Query 49909 GATCTAACGGTTT-CTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAA 49967 | || | || ||| | || || ||| | ||| || | | |||||||| Sbjct 1768330 TCTTGGACAGCTTGCTTGGATGGGCGG-TGCTTGAGATGGGAGAAGAGGAGGCATGCGAA 1768272 Query 49968 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCAT 50027 |||| ||| ||||| ||||| | || |||||||| ||||| |||||||||| ||| Sbjct 1768271 ATCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTTGAAAAGGTGAGTCCGGCCAT 1768212 Query 50028 TAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTC 50087 || |||||||| || ||||| || || || || || || || || || ||||| ||||| Sbjct 1768211 GAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAAAAGATACCTTC 1768152 Query 50088 TACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG---CTGTCATGTATCCACTT 50144 || || || || || ||||| | | || | ||| | | || || ||||| || Sbjct 1768151 AACGGCAGCGAATGCGACAAGACGTTGAGCAAAGGTGGAGTTCTTATCTTGAATCCATTT 1768092 Query 50145 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 50177 |||||| ||||||||||| || | ||||| Sbjct 1768091 GACAGCCCAGTCGGCCTTCTTCTTGATGCAAGG 1768059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718265478006800