Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq7 125 1e-23 seq4 111 2e-19 seq21 84.2 3e-11 >seq7 Length=2023280 Score = 125 bits (138), Expect = 1e-23 Identities = 200/282 (71%), Gaps = 4/282 (1%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||||||||| |||| || || ||||| | |||||| | ||| || Sbjct 1767672 ATCTGGCAGATGTACAAAAAGGCAGAGGCATCTTTCTGGACCGCAGAAGAGATTGATTTG 1767731 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || ||||| || |||| ||| | | | | | ||| ||||| | || || || Sbjct 1767732 TCAAAGGATCTCCACGACTGGAACAACAGACTCAATGATGACGAGCGTTACTTCATCTCC 1767791 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTG-TTGACACG 125197 ||| || | || ||||| |||| || || ||||| |||||||| || || |||| || Sbjct 1767792 CACGTTCTCGCATTCTTCGCCGCATCAGACGGAATTGTCAACGAGAACTTGGTTGAG-CG 1767850 Query 125198 ATTCTCTCAAGA-GTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256 |||| | || ||| | || ||||||| ||||| ||||| ||||||||||||| Sbjct 1767851 ATTCAGTGGTGAAGTTCAA-ATCCCAGAGGCACGATGCTTCTACGGTTTCCAAATCATGA 1767909 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACA 125298 | |||||| | ||||| |||| |||||| || || |||| Sbjct 1767910 TGGAGAACATTCACTCCGAAACATACTCTCTTCTCATCGACA 1767951 >seq4 Length=2560074 Score = 111 bits (122), Expect = 2e-19 Identities = 339/516 (66%), Gaps = 6/516 (1%) Strand=Plus/Minus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865 || || || ||| | | ||| | || || |||||| || | | ||| || || || | Sbjct 941349 ACCAATGGAAACTCTAACGGCATCGTTCCTATGCTCCGAGTTTTCAACAACACTGCCA-G 941291 Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925 ||| ||| || || || ||||| || || || || | || || ||| | || || || Sbjct 941290 ATATGTTGATCAAGGTGGTAATAAGCGTCCTGGTGCCTTTGCTGTTTACCTTGAGCCATG 941231 Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985 ||| ||||| |||||||| || | || | |||||||| |||| ||||| | || Sbjct 941230 GCATGCGGATGTTTTTGAGTTCCTTGATCTACGCAAAAATCATGGCAAGGAAGAAGTTCG 941171 Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGA 97045 || | || | || || || | ||| | || ||| | ||||||||||| || | | Sbjct 941170 TGCACGCGATCTCTTCTACGCCTTGTGGATTCCTGATCTATTCATGAAGCGTGTTGAAAA 941111 Query 97046 CGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGG 97105 ||| | |||| || ||||||||| || | || ||| | | ||| | || Sbjct 941110 GAATGGAGATTGGACTCTCATGTGCCCCAACGAATGTCCAGGTTTAGCAGATGTTTATGG 941051 Query 97106 CGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAG-AGGGCCGATACGTGAGACGAG 97164 ||| ||||| ||||| ||| || ||||| | | ||| | || |||| | Sbjct 941050 CGAGGAGTTCGAGGCTCTCTACGAGGGTTACGAAAAGGCAGGCAAGGGTCGCAAGACTA- 940992 Query 97165 TCGATGCACGAGAACTGTGGAAGGCCA-TCGTGACGGCTCAGGTAGAGACTGGAACTCCG 97223 || | || | | |||| ||| | ||| || ||| |||||| ||||| |||| ||| Sbjct 940991 TCAAGGCTCAAAAACTTTGGTACTCCATTCTTGA-GGCTCAAACCGAGACCGGAAATCCT 940933 Query 97224 TACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATC 97283 | ||| || ||||||||| | || || ||||||||| || |||| || || Sbjct 940932 TTCATGCTTTACAAGGATGCATGCAACAAGAAGAGCAACCAAAAGAACCTGGGTACTATT 940873 Query 97284 AAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTAC 97319 |||||||| ||||||||||||| || |||||| Sbjct 940872 CGCAGCTCCAATTTGTGCACGGAAATCGTCGAGTAC 940837 >seq21 Length=772658 Score = 84.2 bits (92), Expect = 3e-11 Identities = 158/227 (70%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 70064 GAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTA 70123 || || ||| | || || ||||| || || || ||| | || | || |||| || | Sbjct 133379 GAAGGAGATTTAGGTCCTGTGTATGGGTTTCAATGGCGACATTTCGGTGCCAAATACATT 133320 Query 70124 GACTGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAATT-GCAGACAATCATTGACAC 70182 || ||||||||| || | || || |||||||||||| | || || | | || | Sbjct 133319 GATGCCGAGACAGATTACACAGGACAAGGTGTTGATCAACTAGCGGAAATTGTATGGAAA 133260 Query 70183 TCTCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTT 70242 | | |||| || ||| ||||||||||| | || || |||||||| ||||||| | Sbjct 133259 T-TAAAGAATAACCCATGGGATAGGAGGATTATTCTGAGCGCATGGAATGTTGCAGATAT 133201 Query 70243 GCACCAAATGGCACTACCACCGTGTCAC-TGTTTGGCTCAGTTTTAC 70288 | ||||||| ||||||| |||||| ||||| || || |||||| Sbjct 133200 CAAGTTAATGGCATTACCACCTTGTCACATGTTT-GCACAATTTTAC 133155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741055772601200