Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017-
05-31] 370 sequences; 44,096,448 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq1 91.5 1e-13
>seq1
Length=3544467
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 18832 CACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTC 18891
||||| |||||| || |||||||||||||||||||||| | ||| || |||||||
Sbjct 2377649 CACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCGAAAGGGTTCTGCCGTCCTC 2377708
Query 18892 CAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGC 18951
|| ||| || || ||| | || | || || ||||| || | |||||| |||||
Sbjct 2377709 CAACTGCTTTCCTGCAAAGATCAATCGTTGTTGATCAGGTGGAATGCCCTCCTTGTCCTG 2377768
Query 18952 AATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTT 19011
||| || ||| || | | | ||||| | ||| ||| | ||||| || ||
Sbjct 2377769 AATCTTTGATTTAACATTATCAATGGTATCTGACGATTCCACTTCTAATGTAATTGTCTT 2377828
Query 19012 ACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| || || || |||||||| ||||||||
Sbjct 2377829 GCCAGTCAAGGTCTTGACAAAGATTTGCAT 2377858
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414570930535780
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |