Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq1 102 6e-17 >seq1 Length=3544467 Score = 102 bits (112), Expect = 6e-17 Identities = 151/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 43912 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCT--CATCG 43969 |||||| || | ||||| || ||||||||||| ||||| || | || | || Sbjct 2377649 CACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCG--AAAGGGTTCTGCCGTCC 2377706 Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029 ||||| || ||||||||||| ||||| ||||| || || | || | || || || || Sbjct 2377707 TCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGATCAGGTGGAATGCCCTCCTTGTCC 2377766 Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089 ||| ||| ||| || || ||| ||||||| || ||||| || | |||||||| Sbjct 2377767 TGAATCTTTGATTTAACATTATCAATGGTATCTGACGATTCCACTTCTAATGTAATTGTC 2377826 Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || || || ||||| ||||| |||||||| Sbjct 2377827 TTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 2377858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354776000174760