Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq4 206 3e-48 seq7 168 8e-37 >seq4 Length=2560074 Score = 206 bits (228), Expect = 3e-48 Identities = 1299/2065 (63%), Gaps = 49/2065 (2%) Strand=Plus/Plus Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054 ||||||||||| || || || || | | ||||||| |||||||||||| || || | | Sbjct 939887 GTGAATTGAATAGGTGCTGAGGCAGCCATAGTACGTAAATAGTACATTCCGGTCTTCAAA 939946 Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114 || | |||| || ||||||||| || | ||| | ||||| || Sbjct 939947 CCCAATTTCCAACCAGCAAAATGCATGGATGTAATCTTGCCCATTGTAGGATCCTTCATG 940006 Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62174 || || ||||| |||||| |||||||||||| || || | || |||||||||| | Sbjct 940007 TGAATGTTCATTGATTGAGATTGATCGATGAATGCACCACGATCAGCAGCCATTTGAACA 940066 Query 62175 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62234 || || ||| | |||||||||| ||| || |||| ||| || || |||||| Sbjct 940067 ATTGTTCGTTGAGAGATTTCCCAAACAGTCTTGTAAAGAGCCTTGATGTCAGCTGGAATA 940126 Query 62235 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62291 || | |||| ||||||||||||||||| || || || | ||||| || | ||| | Sbjct 940127 TTGGGGATATTTTGAATGGATCCACCATCAGCAATGATACGGTTCTTCATATTGTCAGAC 940186 Query 62292 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 62351 || | | ||| | | | || || || ||||| ||||| |||||||| Sbjct 940187 CAGAGACCCATATCGACAAGGTCCTTGAGAAGCCATGGGTTAACGACTTGGAATTCTCCG 940246 Query 62352 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCC 62411 | | || | |||| ||| || || || || || || | | || || || Sbjct 940247 GCAAGAACACGACGAGAGTAGATGTTTGAAGTGTAAGGCTCGAAACATTCGTTGAAGCCA 940306 Query 62412 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 62471 | |||||| | || ||||| ||||||||||| || | | | || | | ||| Sbjct 940307 AGAATTTGGGATGTGCTAGCAGTAGGCATAGGTGCAACTAGGAGAGAGTTGCGGATTCCG 940366 Query 62472 TATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNN 62531 | | |||| | || | || ||||||| ||| | ||| | ||| ||| Sbjct 940367 TGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCAGTAGGTGTAACCCCC 940426 Query 62532 NNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGT 62591 ||| || ||| ||| | | || ||| ||| || |||||||| Sbjct 940427 CACATATCGTATTGAAGTTCACCCTTAGAGACTGGGGAGCCTTGATAGGTTTCGTATGGG 940486 Query 62592 CC---TTCCTTCTC-AGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTC 62647 || |||||| | | || | | || | | || ||| ||| || ||||| || Sbjct 940487 CCAAGTTCCTTTGCGATCTCGA-CGGAAGAGGTC---AAGGCAGCGTGGTAGATGGTCTC 940542 Query 62648 GAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAG--A 62705 ||| || | | || || | || ||||| || ||||||||| | ||||| | Sbjct 940543 GAAAATTTGTATGTTGAGGTGTTTGGCTTCTGGGGAGTCAAATGGAAGACG-AAGAGCCA 940601 Query 62706 ATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 62765 | ||| || || || | ||||||||||| | ||||||||| ||| | ||| | Sbjct 940602 AGAAA-GCATCAGCAAGACCTTGAACACCGACCGCGATAGGTCGATGACGGAAATT-GCT 940659 Query 62766 ATTTCAG-CTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGAC 62824 |||| | | |||| | ||||| || || || || ||||| ||||| | ||||| || Sbjct 940660 TTTTCGGGCCTCTGCGACTGGATAGTAGTTGATGTCAATAATCTTATTCAAGTTTCTAAC 940719 Query 62825 AATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---TCGCCCATCTATT---AC 62878 || |||| ||| || || | || || | |||||| | || | ||| || || Sbjct 940720 AACAACTTGGACAACCTCGTGAAGCTTTTGGAAATCATAAGTTCCCTCATTCATGTTGAC 940779 Query 62879 -AAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCAT 62937 ||| || | ||| | | || |||| ||||| || ||||||| | | | | Sbjct 940780 GAAAGTTGGTAAAG-CGATGGAAGCCAAGTTACAGCAAGCAACCTCATCTGGTGCAGAGT 940838 Query 62938 ATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTAC 62997 | | | || || ||||| | ||| | ||||| || | || | ||| || | Sbjct 940839 ACTCGACGATTTCCGTGCACAAATTGGAGCTGCGAATAGTACCCAGGTTCTTTTGGTTGC 940898 Query 62998 TCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATT 63057 |||| ||||| || |||||||| ||||| ||||| ||| | || || || | |||| | Sbjct 940899 TCTTCTTGTTGCATGCATCCTTGTAAAGCATGAAAGGATTTCCGGTCTCGGTTTGAGCCT 940958 Query 63058 CTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTC--- 63114 | | ||| | | ||| | | ||||||| || || ||| | | | || Sbjct 940959 CAAGAATGGAGTACCAAAGTTTTTGAGCCTTGAT---AGTCTTGCGACCCTTGCCTGCCT 941015 Query 63115 TTTCGTATAGT--GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGG 63172 ||||||| ||| | | | |||||||| || || |||||| | || || || Sbjct 941016 TTTCGTAACCCTCGTAGAGAGCC--TCGAACTCCTCGCCATAAACATCTGCTAAACCTGG 941073 Query 63173 ACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAG 63232 |||||| | || ||||| | | ||| ||||| | | | || || ||||| || || Sbjct 941074 ACATTCGTTGGGGCACATGAGAGTCCAATCTCCATTCTTTTCAACACGCTTCATGAATAG 941133 Query 63233 ATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATT 63292 |||||||||||| | || || ||||| | | | | ||| || || || ||| Sbjct 941134 ATCAGGAATCCACAAGGCGTAGAAGAGATCGCGTGCACGAACTTCTTCCTTGCCATGATT 941193 Query 63293 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCAT 63352 || ||||| |||||| | | || ||| | |||||| || || | ||| | || | Sbjct 941194 TTTGCGTAGATCAAGGAACTCAAAAACATCCGCATGCCATGGCTCAAGGTAAACAGCAAA 941253 Query 63353 AACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 63412 | ||||| || || || || || ||||| | ||||| || ||||| || |||||| Sbjct 941254 GGCACCAGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAAACTCG 941313 Query 63413 CAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGC 63472 | ||| |||| || ||||| || | ||||||||||||| || || ||| | || Sbjct 941314 GAGCATAGGAACGATGCCGTTAGAGTTTCCATTGGTACCGGCTATGTATGCGCCAGTAGC 941373 Query 63473 ACGAAT---ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 63529 ||| || | | | |||| ||||| || || || || | || ||||| | || || Sbjct 941374 ACGGATTCGGTGAAT-ATTG--AGACCAATACCACCAGCATTCTTTGAGATCATAGCACA 941430 Query 63530 TCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACA 63589 || || || || || ||||| || || || || || |||||| | || || || Sbjct 941431 AATCTTCAAAGTATCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATAAGGAAGCA 941490 Query 63590 GCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAA 63649 || | ||| | ||| |||||| || | || || || || || || || Sbjct 941491 TGATGAAAGTTGTGCTTGTGGAGTACCCGCAGAGAAGAGTGTTGGCGAGGCATGTGTGAA 941550 Query 63650 CCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAA 63708 | || | || | | ||||| || || || || || || || || | |||| Sbjct 941551 GTACTTGTTTGACATCAAGTTGTATGTTTCGATGGCACTTTCAATGTCATCACCG-TGAA 941609 Query 63709 TTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTT 63768 | || || || |||||||| | ||| || || || | ||| | | ||| | | Sbjct 941610 TACCAACGGCAACACGCATGATCATTTGTTGTGGACGTTCTGCAACTTTGCCATCAAGAC 941669 Query 63769 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCG 63826 | | ||| ||| || | ||| || || ||||| || | || ||||| ||||| Sbjct 941670 GTAGAAGGTATGATCGCTCGAGAGTCTTGAATCCAAAGTATTGATAGTTGAAA--TCTCG 941727 Query 63827 TTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGAT 63886 ||||| | ||| | || || |||| |||| || | | |||| || | || | Sbjct 941728 GTCGTAGACAATGGCAGAATTAAGTTCCTCCTCATGTCTCATAACACATTCGAAAGT-TT 941786 Query 63887 ACTTG-AAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCT 63945 |||| ||| || ||||| | | |||||| | || || ||| | | ||||||| Sbjct 941787 CCTTGCTAATCATAGGAGATGCTGTGCCATTTCTTGGGTTTGTATATTGGTATAAATCGC 941846 Query 63946 CCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGG 64005 || || | || ||||||| |||| ||||| || || || || || || | | Sbjct 941847 GAATAACGTGCGAGAACTGTTTTTTGGTTTGTTTGTGAAGGTTGGAGACTGCAATACGAG 941906 Query 64006 CGGCTAGAATGGCATAATCCGGATG 64030 | ||||||||||||||||| ||||| Sbjct 941907 CAGCTAGAATGGCATAATCGGGATG 941931 >seq7 Length=2023280 Score = 168 bits (186), Expect = 8e-37 Identities = 574/902 (64%), Gaps = 63/902 (7%) Strand=Plus/Minus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 |||||||| ||||| || | ||||||||||| ||||| || || |||| || ||||| Sbjct 1768570 TTTTGGTAATCACCAACTCTCTTTTCGAAAAAGTTAGTCTTGCCGGCCAAGGAAATATTC 1768511 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 |||||||| ||||| ||||||| | || || | ||| | ||||| | | Sbjct 1768510 TCCATGAAGTCAAATGGATTGGCAGATTTGTAGACTTTGTCGTTGCCCAAAGCGATGAGG 1768451 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192 | | ||| || |||||||| || || ||||| | | ||||| |||| ||| Sbjct 1768450 AGACGATCAGCAACGAATTCGATGTACTGCTTCATGAGGGTGGAGTTCATGCCTAGAAGA 1768391 Query 33193 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 33252 | ||||||||| | || | |||||||| || || | || || || || || | Sbjct 1768390 GCACAAGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTGCGACGGCCTCGGTGATGACG 1768331 Query 33253 GATCTAACGGTTT-CTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAA 33311 | || | || ||| | || || ||| | ||| || | | |||||||| Sbjct 1768330 TCTTGGACAGCTTGCTTGGATGGGCGG-TGCTTGAGATGGGAGAAGAGGAGGCATGCGAA 1768272 Query 33312 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCAT 33371 |||| ||| ||||| ||||| | || |||||||| ||||| |||||||||| ||| Sbjct 1768271 ATCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTTGAAAAGGTGAGTCCGGCCAT 1768212 Query 33372 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTC 33431 || |||||||| || ||||| || || || ||||| ||||| || || ||||| ||||| Sbjct 1768211 GAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAAAAGATACCTTC 1768152 Query 33432 TACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG---CTGTCATGTATCCACTT 33488 || ||||| || || | ||| | | || | || | | || || ||||| || Sbjct 1768151 AACGGCAGCGAATGCGACAAGACGTTGAGCAAAGGTGGAGTTCTTATCTTGAATCCATTT 1768092 Query 33489 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA------------------------- 33523 |||||| ||||||||||| || | ||||| | Sbjct 1768091 GACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGAACTATCAAGCTTGTTAGTTGAATTCA 1768032 Query 33524 --------------------------TCGTTTCTATGGCATTAAAGAGATA-Gt-ttttt 33555 | || || || ||||| ||||| || || |||| Sbjct 1768031 CGTAACAATATATGATTATCACCTACTGGTATCAATAGCATTGAAGAGGTATGTCTTTTG 1767972 Query 33556 tCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTT 33615 | || | || || | ||| || ||||| | |||| || |||| || |||||||| Sbjct 1767971 TGCTTGC--TCCTTGATATATGTGTCGATGAGAAGAGAGTATGTTTCGGAGTGAATGTTC 1767914 Query 33616 TCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAA 33675 || || || || || |||||||| |||| ||||| | || || ||||| || Sbjct 1767913 TCCATCATGATTTGGAAACCGTAGAAGCATCGTGCCTCTGGGATTTGAACTTCACCACTG 1767854 Query 33676 AATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACA 33735 ||||| || |||| || || || || |||||||| || || || || || | || Sbjct 1767853 AATCGCTCAACCAAGTTCTCGTTGACAATTCCGTCTGATGCGGCGAAGAATGCGAGAACG 1767794 Query 33736 TGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATTGATATCTTTA 33792 || || || || ||||| | ||| || ||||| || | || ||| || Sbjct 1767793 TGGGAGATGAAGTAACGCTCGTCATCATTGAGTCTGTTGTTCCAGTCGTGGAGATCCTTT 1767734 Query 33793 GATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAG 33852 || | ||| | ||||| | ||||| || ||||||||||||||||| ||||| | |||| Sbjct 1767733 GACAAATCAATCTCTTCTGCGGTCCAGAAAGATGCCTCTGCCTTTTTGTACATCTGCCAG 1767674 Query 33853 AT 33854 || Sbjct 1767673 AT 1767672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622944318869200