Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1 102 8e-17 seq15 89.7 5e-13 >seq1 Length=3544467 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 26787 ACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTC 26846 ||| | || || || | || ||| |||| | || || | |||||||||||| | ||| Sbjct 2378578 ACAGTGACCGGTAAGACCATTACCCTCGAGGTTGAGTCCAGCGACACCATCGACAACGTC 2378519 Query 26847 AAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGC 26906 || ||||| ||||| || || || |||||||| ||||| | | || | || | Sbjct 2378518 AAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCCGACCAACAGCGTTTGATCTTCGCC 2378459 Query 26907 GGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACT 26966 || |||||||| ||||||| | | | | | || ||||| ||||| || || || || ||| Sbjct 2378458 GGAAAACAACTTGAAGATGGTCGCACCTTGAGTGACTACAACATCCAGAAGGAGTCCACT 2378399 Query 26967 ATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||| ||||||| |||||| | || || Sbjct 2378398 CTCCACTTGGTCCTCAGACTTCGTGGTGG 2378370 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 26793 ACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAA 26852 || ||||| | |||||| | || | ||||| ||||||||||| | || || Sbjct 2378290 ACCGGAAAGACCATCACCCTTGAGGTCGAATCTTCAGACACCATCGACAACGTTAAGTCT 2378231 Query 26853 AAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAA 26912 |||||| ||||| ||||| || |||||||| ||||| | | |||| || ||| || Sbjct 2378230 AAGATTCAAGACAAGGAAGGCATTCCTCCCGACCAACAGCGTTTGATTTTCGCCGGAAAG 2378171 Query 26913 CAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCAT 26972 ||||| ||||||| | | | | | ||| ||||| || || ||||| ||||| | || Sbjct 2378170 CAACTGGAAGATGGTCGCACCCTTTCCGATTATAATATCCAGAAAGAGTCTACCCTTCAC 2378111 Query 26973 CTGGTCCTGAGACTTAGAGGAGG 26995 ||||||| |||||| | || || Sbjct 2378110 TTGGTCCTCAGACTTCGTGGTGG 2378088 >seq15 Length=1659866 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || | || || ||| | |||||| |||| | || || | Sbjct 675466 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCC 675525 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | ||||| ||||| ||||| || || || || ||||| ||| Sbjct 675526 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCACCCGACCAA 675585 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || | || | || ||| || ||||||||||||| | | | | | ||| || ||| Sbjct 675586 CAGCGATTGATCTTCGCCGGAAAGCAACTCGAAGATGGTCGCACCCTTTCCGATTACAAC 675645 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGT 26977 || ||||| || |||||| | || |||| Sbjct 675646 ATCCAAAAGGAGTCTACTCTTCACTTGGT 675674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478660186186400