Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017-
05-31] 370 sequences; 44,096,448 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 8e-17
seq15 89.7 5e-13
>seq1
Length=3544467
Score = 102 bits (112), Expect = 8e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 26787 ACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTC 26846
||| | || || || | || ||| |||| | || || | |||||||||||| | |||
Sbjct 2378578 ACAGTGACCGGTAAGACCATTACCCTCGAGGTTGAGTCCAGCGACACCATCGACAACGTC 2378519
Query 26847 AAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGC 26906
|| ||||| ||||| || || || |||||||| ||||| | | || | || |
Sbjct 2378518 AAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCCGACCAACAGCGTTTGATCTTCGCC 2378459
Query 26907 GGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACT 26966
|| |||||||| ||||||| | | | | | || ||||| ||||| || || || || |||
Sbjct 2378458 GGAAAACAACTTGAAGATGGTCGCACCTTGAGTGACTACAACATCCAGAAGGAGTCCACT 2378399
Query 26967 ATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|||| ||||||| |||||| | || ||
Sbjct 2378398 CTCCACTTGGTCCTCAGACTTCGTGGTGG 2378370
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 26793 ACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAA 26852
|| ||||| | |||||| | || | ||||| ||||||||||| | || ||
Sbjct 2378290 ACCGGAAAGACCATCACCCTTGAGGTCGAATCTTCAGACACCATCGACAACGTTAAGTCT 2378231
Query 26853 AAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAA 26912
|||||| ||||| ||||| || |||||||| ||||| | | |||| || ||| ||
Sbjct 2378230 AAGATTCAAGACAAGGAAGGCATTCCTCCCGACCAACAGCGTTTGATTTTCGCCGGAAAG 2378171
Query 26913 CAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCAT 26972
||||| ||||||| | | | | | ||| ||||| || || ||||| ||||| | ||
Sbjct 2378170 CAACTGGAAGATGGTCGCACCCTTTCCGATTATAATATCCAGAAAGAGTCTACCCTTCAC 2378111
Query 26973 CTGGTCCTGAGACTTAGAGGAGG 26995
||||||| |||||| | || ||
Sbjct 2378110 TTGGTCCTCAGACTTCGTGGTGG 2378088
>seq15
Length=1659866
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || || || || | || || ||| | |||||| |||| | || || |
Sbjct 675466 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCC 675525
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||||||||| | ||||| ||||| ||||| || || || || ||||| |||
Sbjct 675526 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCACCCGACCAA 675585
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || | || | || ||| || ||||||||||||| | | | | | ||| || |||
Sbjct 675586 CAGCGATTGATCTTCGCCGGAAAGCAACTCGAAGATGGTCGCACCCTTTCCGATTACAAC 675645
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGT 26977
|| ||||| || |||||| | || ||||
Sbjct 675646 ATCCAAAAGGAGTCTACTCTTCACTTGGT 675674
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478660186186400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |