Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq4 269 7e-67 seq2 104 6e-17 >seq4 Length=2560074 Score = 269 bits (298), Expect = 7e-67 Identities = 1150/1789 (64%), Gaps = 31/1789 (2%) Strand=Plus/Minus Query 363386 ATATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCT-CGTATCAATGGTGATATT 363444 ||| ||| |||| ||||| | ||| ||| ||||| ||| ||| | |||| | || Sbjct 941710 ATACTTT-GGATTCAAGACTCTCGAGCGATCATACCT-TCTACGTCTTGATGGCAAAGTT 941653 Query 363445 GTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTT 363504 | ||||| || || || ||| | ||||||||||| ||||||| || | || || Sbjct 941652 GCAGAACGTCCACAACAAATGATCATGCGTGTTGCCGTTGGTATTCACGGTGATGACATT 941593 Query 363505 GATGCCGCGATTGAAACATATAAGCTTCTAAGTGCT-CGTGTA-TTCACGCACGCCACGC 363562 || || || |||||||| || ||| | || | ||| ||||| || ||| ||| Sbjct 941592 GAAAGTGCCATCGAAACATACAA-CTTG-ATGTCAAACAAGTACTTCACACATGCCTCGC 941535 Query 363563 CAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAA 363622 ||||| | | | ||| || |||| | |||| | || || ||||| ||| | | | Sbjct 941534 CAACACTCTTCTCTGCGGGTACTCCACAAGCACAACTTTCATCATGCTTCCTTATCGACA 941475 Query 363623 TGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCA 363682 ||||||| || || || ||||| | || || | |||| ||||||| | || || | Sbjct 941474 TGAAGGAGGACAGTATTGATGGTATTTACGATACTTTGAAGATTTGTGCTATGATCTCAA 941415 Query 363683 AGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATT 363741 ||||||| || || |||||| | || ||| | ||||| || | | ||||| Sbjct 941414 AGAATGCTGGTGGTATTGGTCTCAATATTCACCGAATCCGTGCTACTGG-CGCATACATA 941356 Query 363742 CGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACT 363801 ||| || ||| |||| || || | ||||| ||||| || || || |||| ||| Sbjct 941355 GCCGGTACCAATGGAAACTCTAACGGCATCGTTCCTATGCTCCGAGTTTTCAACAACACT 941296 Query 363802 GCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAG 363861 || || || || || || ||||| ||||| || || |||||| | || || ||| Sbjct 941295 GCCAGATATGTTGATCAAGGTGGTAATAAGCGTCCTGGTGCCTTTGCTGTTTACCTTGAG 941236 Query 363862 CCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAA 363921 || ||||| ||| |||||||||| ||||| || || ||||| || || || ||| Sbjct 941235 CCATGGCATGCGGATGTTTTTGAGTTCCTTGATCTACGCAAAAATCATGGCAAGGAAGAA 941176 Query 363922 TTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTG 363981 | |||||||| ||||| ||||| || | ||| || |||| | || |||||||| || Sbjct 941175 GTTCGTGCACGCGATCTCTTCTACGCCTTGTGGATTCCTGATCTATTCATGAAGCGTGTT 941116 Query 363982 GAGGCAGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGT 364040 || || || ||||| | ||| | ||||| |||||||||||||| | | ||||| Sbjct 941115 GAAA-AGAATGGAGATTGGACTCTCATGTGCCCCAACGAATGTCCAGGTTTAGCAGATGT 941057 Query 364041 ATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAA 364100 | || || || | | ||||| ||||| || ||| || || |||| ||| || Sbjct 941056 TTATGGCGAGGAGTTCGAGGCTCTCTACGAGGGTTACGAAAAGGCAGGCAAGGGTCGCAA 940997 Query 364101 GACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAAC 364160 ||| || || || || || |||| |||| | || | || | ||||| |||| Sbjct 940996 GACTATCAAGGCTCAAAAACTTTGGTACTCCATTCTTGAGGCTCAAACCGAGACCGGAAA 940937 Query 364161 ACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTAC 364220 || | ||| | ||||| ||| | |||||| ||| |||||| || |||| ||||| Sbjct 940936 TCCTTTCATGCTTTACAAGGATGCATGCAACAAGAAGAGCAACCAAAAGAACCTGGGTAC 940877 Query 364221 AATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTG 364279 |||| |||| ||| | || || || || | || ||| | || || || ||| || Sbjct 940876 TATTC-GCAGCTCCAATTTGTGCACGGAAATCGTCGAGTACTCTGCACCAGATGAGGTTG 940818 Query 364280 CCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG------TAAAAGATGGTACTT 364333 | |||||| | || || ||||| | || | || | | || || || |||| Sbjct 940817 CTTGCTGTAACTTGGCTTCCATCGCTTTACCAACTTTCGTCAACATGAATGAGGGAACTT 940758 Query 364334 TTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTA 364393 ||| ||| | ||| | || || | | || | | | || | | ||| ||| Sbjct 940757 ATGATTTCCAAAAGCTTCACGAGGTTGTCCAAGTTGTTGTTAGAAACTTGAATAAGATTA 940698 Query 364394 TCGACAAGAATTATTATCCAATTCCTGAAG-CCGAGCGTTCTAATATGCGTCATCGCCCG 364452 | |||| || || |||||| | | || | |||| | ||| | |||||||| || Sbjct 940697 TTGACATCAACTACTATCCAGTCGCAGAGGCCCGAAAAAGC-AATTTCCGTCATCGACCT 940639 Query 364453 ATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGAT 364512 || | | ||||| || || || ||||| | ||| || || | ||||||| Sbjct 940638 ATCGCGGTCGGTGTTCAAGGTCTTGCTGATGCTTTCTTGGCTCTTCGTCTTCCATTTGAC 940579 Query 364513 TCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATG 364572 || || || || || || | | || || || || || || || || || Sbjct 940578 TCCCCAGAAGCCAAACACCTCAACATACAAATTTTCGAGACCATCTACCACGCTGCCTTG 940519 Query 364573 ACTGCTTCGTGTGATTTGGCAAA-AACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCC 364631 || |||| || | ||||| | | || | ||| || ||| | || ||||| Sbjct 940518 ACCTCTTCCGTCGAGATCGCAAAGGAACTTGGCCCA-TACGAAACCTATCAAGGCTCCCC 940460 Query 364632 TCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAA 364691 | || |||| || | || | ||| | ||| || || || ||| ||| | Sbjct 940459 AGTCTCTAAGGGTGAACTTCAATACGATATGTGGGGGGTTACACCTACTGATTTGTGGGA 940400 Query 364692 CTGGGATACGCTACGTTCCAA--CGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACA 364749 |||| || || | ||| | | ||| | || || | |||||||| ||| | Sbjct 940399 TTGGG--ACTCTTTGAAGCAATCCATCAAGCAACACGGAATCCGCAACTCTCTCCTAGTT 940342 Query 364750 GCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCG 364809 || || ||||| || ||| || | || || || || |||||| || ||||| || Sbjct 940341 GCACCTATGCCTACTGCTAGCACATCCCAAATTCTTGGCTTCAACGAATGTTTCGAGCC- 940283 Query 364810 TTTACA-AGCAATC-TTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATA 364867 ||||| ||| | | || || || || |||||| |||||||||| | || ||||| Sbjct 940282 -TTACACTTCAAACATCTACTCTCGTCGTGTTCTTGCCGGAGAATTCCAAGTCGTTAACC 940224 Query 364868 AGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATA 364927 | || ||||||| ||| ||| || || ||| ||||| ||||||||| || Sbjct 940223 CATGGCTTCTCAAGGACCTTGTCGATATGGGTCTCTGGTCTGACAATATGAAGAACCGTA 940164 Query 364928 TCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTA 364987 |||| || | | ||| || | || || || || |||||| || | ||| || Sbjct 940163 TCATTGCTGATGGTGGATCCATTCAAAATATCCCCAATATTCCAGCTGACATCAAGGCTC 940104 Query 364988 TTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCG 365047 ||||||| || || |||||||| || ||||| | || | ||||| || ||||| | Sbjct 940103 TTTACAAGACTGTTTGGGAAATCTCTCAACGAACAATTGTTCAAATGGCTGCTGATCGTG 940044 Query 365048 GTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCA 365107 |||| || ||| ||| || || | ||| | ||||| | || || | || Sbjct 940043 GTGCATTCATCGATCAATCTCAATCAATGAACATTCACATGAAGGATCCTACAATGGGCA 939984 Query 365108 AGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 || |||||||||||||||| || ||||||| ||| | ||||| || Sbjct 939983 AGATTACATCCATGCATTTTGCTGGTTGGAAATTGGGTTTGAAGACCGG 939935 >seq2 Length=3453044 Score = 104 bits (114), Expect = 6e-17 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 65871 GTTACGAATCGTTCCGTCATAATTGCACATATTATCTTCACTTGCCTTTACAAGACAACG 65930 |||||||| || |||||||| || ||| ||| ||| || || ||||||| ||| Sbjct 2127080 GTTACGAACGGTACCGTCATATTTAGCCATGACATCCTCAAGAGCTTTGACAAGACGACG 2127139 Query 65931 CTGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTATCAACGAGACCTTCACGCCCGGA 65990 || ||||||||| | | |||||| || ||||| ||||||| ||||||||||| || | Sbjct 2127140 TTGAATGTAACCAGTTTCTGCAGTCTTAACCGCAGTATCAATCAGACCTTCACGACCAGC 2127199 Query 65991 CATTGCAGAAAAGAAAAACTCAGTCGG 66017 |||||| ||| |||||||| || || Sbjct 2127200 CATTGCGTGAAAAAAAAACTCTGTTGG 2127226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303347421289340