Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017-
05-31] 370 sequences; 44,096,448 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq15 129 6e-25
seq1 98.7 9e-16
>seq15
Length=1659866
Score = 129 bits (142), Expect = 6e-25
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| | ||| || || | || ||||||||||| ||||||||||||
Sbjct 675692 CCACCACGGAGACGTAACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAA 675633
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || || || ||||| || ||| |||| || ||||| ||||| || ||
Sbjct 675632 AGGGTGCGACCATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGA 675573
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
||||| || ||||| ||| || ||||| | || | || |||| ||||| |
Sbjct 675572 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACC 675513
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238
|||| ||| | |||||| || || || || || ||||| ||||||||||||
Sbjct 675512 TCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGACT 675462
>seq1
Length=3544467
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || ||||||| ||||| ||||||||||||||||||||
Sbjct 2377860 CCACCACGGAGACGAAGGACCAAATGTAAAGTCGATTCCTTTTGAATGTTGTAATCCGAA 2377919
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || |||||| || ||||| || || |||| | ||| || || || || |||
Sbjct 2377920 AGTGTACGACCGTCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTGGG 2377979
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || || || ||| ||| ||| | | || | ||||| | || || |
Sbjct 2377980 ATACCCTCCTTATCTTGGATCTTCGACTTCACATTGTCGATGGTATCCGATGATTCAACC 2378039
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | || || ||||| || || || ||||||||||||||
Sbjct 2378040 TCCAAAGTGATTGTCTTTCCGGTAAGGGTCTTGACGAAAATCTGCAT 2378086
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472010616940800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |