Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq4 219 5e-52 seq7 154 2e-32 >seq4 Length=2560074 Score = 219 bits (242), Expect = 5e-52 Identities = 1304/2066 (63%), Gaps = 51/2066 (2%) Strand=Plus/Plus Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909 ||||||||||| || || || || | | ||||||| |||||||||||| || || | | Sbjct 939887 GTGAATTGAATAGGTGCTGAGGCAGCCATAGTACGTAAATAGTACATTCCGGTCTTCAAA 939946 Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 61969 || | |||| || ||||||||| || | ||| | ||||| || Sbjct 939947 CCCAATTTCCAACCAGCAAAATGCATGGATGTAATCTTGCCCATTGTAGGATCCTTCATG 940006 Query 61970 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATA 62029 || || ||||| |||||| |||||||||||| || || | || |||||||||| | | Sbjct 940007 TGAATGTTCATTGATTGAGATTGATCGATGAATGCACCACGATCAGCAGCCATTTGAACA 940066 Query 62030 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62089 || || ||| | |||||||||| ||| || |||| ||| || || |||||| Sbjct 940067 ATTGTTCGTTGAGAGATTTCCCAAACAGTCTTGTAAAGAGCCTTGATGTCAGCTGGAATA 940126 Query 62090 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62146 || | |||| ||||||||||||||||| || || || | ||||| || | ||| | Sbjct 940127 TTGGGGATATTTTGAATGGATCCACCATCAGCAATGATACGGTTCTTCATATTGTCAGAC 940186 Query 62147 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 62206 || | | ||| | | | || || || ||||| ||||| |||||||| Sbjct 940187 CAGAGACCCATATCGACAAGGTCCTTGAGAAGCCATGGGTTAACGACTTGGAATTCTCCG 940246 Query 62207 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 62266 | | || | |||| ||| || || || || || || | | | || || || Sbjct 940247 GCAAGAACACGACGAGAGTAGATGTTTGAAGTGTAAGGCTCGAAACATTCGTTGAAGCCA 940306 Query 62267 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 62326 | |||||| | || ||||| ||||||||||| || | | | || | | ||| Sbjct 940307 AGAATTTGGGATGTGCTAGCAGTAGGCATAGGTGCAACTAGGAGAGAGTTGCGGATTCCG 940366 Query 62327 TATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNN 62386 | | |||| | || | || ||||||| ||| | ||| | ||| ||| Sbjct 940367 TGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCAGTAGGTGTAACCCCC 940426 Query 62387 NNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGT 62446 ||| || ||| ||| | | || ||| ||| || |||||||| Sbjct 940427 CACATATCGTATTGAAGTTCACCCTTAGAGACTGGGGAGCCTTGATAGGTTTCGTATGGG 940486 Query 62447 CC---TTCCTTCTC-AGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTC 62502 || |||||| | | || | | || | | || ||| ||| || ||||| || Sbjct 940487 CCAAGTTCCTTTGCGATCTCG-ACGGAAGAGGTC---AAGGCAGCGTGGTAGATGGTCTC 940542 Query 62503 GAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAG--A 62560 ||| || | | || || | || ||||| || ||||||||| | ||||| | Sbjct 940543 GAAAATTTGTATGTTGAGGTGTTTGGCTTCTGGGGAGTCAAATGGA-AGACGAAGAGCCA 940601 Query 62561 ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 62620 | ||| || || || | ||||||||||| | ||||||||| ||| | ||| | Sbjct 940602 AGAAA-GCATCAGCAAGACCTTGAACACCGACCGCGATAGGTCGATGACGGAAATT-GCT 940659 Query 62621 ATTTC-AGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGAC 62679 |||| || |||| | ||||| || || || || ||||| ||||| | ||||| || Sbjct 940660 TTTTCGGGCCTCTGCGACTGGATAGTAGTTGATGTCAATAATCTTATTCAAGTTTCTAAC 940719 Query 62680 AATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---TCGCCCATCTA---TTAC 62733 || |||| ||| || || | || || | |||||| | || | ||| | | || Sbjct 940720 AACAACTTGGACAACCTCGTGAAGCTTTTGGAAATCATAAGTTCCCTCATTCATGTTGAC 940779 Query 62734 -AAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCAT 62792 ||| || | || || | || |||| ||||| || ||||||| | | | | Sbjct 940780 GAAAGTTGGT-AAAGCGATGGAAGCCAAGTTACAGCAAGCAACCTCATCTGGTGCAGAGT 940838 Query 62793 ATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTAC 62852 | | | || || ||||| | ||| | || || || | || | ||| || | Sbjct 940839 ACTCGACGATTTCCGTGCACAAATTGGAGCTGCGAATAGTACCCAGGTTCTTTTGGTTGC 940898 Query 62853 TCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATT 62912 |||| ||||| || |||||||| ||||| ||||| ||| | || || || | |||| | Sbjct 940899 TCTTCTTGTTGCATGCATCCTTGTAAAGCATGAAAGGATTTCCGGTCTCGGTTTGAGCCT 940958 Query 62913 CTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTT---TTCTC 62969 | | ||| | | ||| | | |||||| | |||| ||| | ||| | | Sbjct 940959 CAAGAATGGAGTACCAAAGTTTTTGAGCCT---TGATAGTCTTGCGACCCTTGCCTGCCT 941015 Query 62970 TTTCGTA--TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGG 63027 ||||||| ||| | | | |||||||| || || |||||| | | || || Sbjct 941016 TTTCGTAACCCTCGTAGAGAGCC--TCGAACTCCTCGCCATAAACATCTGCTAAACCTGG 941073 Query 63028 ACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAG 63087 |||||| | || ||||| | | ||| ||||| | | | || || ||||| || || Sbjct 941074 ACATTCGTTGGGGCACATGAGAGTCCAATCTCCATTCTTTTCAACACGCTTCATGAATAG 941133 Query 63088 ATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATT 63147 |||||||||||| | || || ||||| | | | | ||| || || || ||| Sbjct 941134 ATCAGGAATCCACAAGGCGTAGAAGAGATCGCGTGCACGAACTTCTTCCTTGCCATGATT 941193 Query 63148 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCAT 63207 || ||||| |||||| | | || ||| | |||||| || || | ||| | || | Sbjct 941194 TTTGCGTAGATCAAGGAACTCAAAAACATCCGCATGCCATGGCTCAAGGTAAACAGCAAA 941253 Query 63208 AACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCT 63267 | ||||| || || || || || ||||| | ||||| || ||||| || |||||| Sbjct 941254 GGCACCAGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAAACTCG 941313 Query 63268 CAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGC 63327 | ||| |||| || || || || | |||||||| || | || || ||| | || Sbjct 941314 GAGCATAGGAACGATGCCGTTAGAGTTTCCATTGGTACCGGCTATGTATGCGCCAGTAGC 941373 Query 63328 ACGAAT---ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 63384 ||| || | | | |||| ||||| || || || || | || ||||| | || || Sbjct 941374 ACGGATTCGGTGAAT-ATTG--AGACCAATACCACCAGCATTCTTTGAGATCATAGCACA 941430 Query 63385 TCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACA 63444 || || ||||| || || || || ||||| || ||| |||||| | || || || Sbjct 941431 AATCTTCAAAGTATCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATAAGGAAGCA 941490 Query 63445 GCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAA 63504 || | ||| | ||| |||||| || | || || || || || || || Sbjct 941491 TGATGAAAGTTGTGCTTGTGGAGTACCCGCAGAGAAGAGTGTTGGCGAGGCATGTGTGAA 941550 Query 63505 CCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAA 63563 | || | || | | ||||| || || || || || || || || | |||| Sbjct 941551 GTACTTGTTTGACATCAAGTTGTATGTTTCGATGGCACTTTCAATGTCATCACCG-TGAA 941609 Query 63564 TTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTT 63623 | || || || |||||||| | ||| || || || | ||| | | ||| | | Sbjct 941610 TACCAACGGCAACACGCATGATCATTTGTTGTGGACGTTCTGCAACTTTGCCATCAAGAC 941669 Query 63624 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCG 63681 | | ||| ||| || | ||| || || ||||| || | || ||||| ||||| Sbjct 941670 GTAGAAGGTATGATCGCTCGAGAGTCTTGAATCCAAAGTATTGATAGTTGAAA--TCTCG 941727 Query 63682 TTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACA-TCCATGGTAA 63740 ||||| | ||| | || || |||| |||| || | | |||| ||| || | || Sbjct 941728 GTCGTAGACAATGGCAGAATTAAGTTCCTCCTCATGTCTCATAAC-ACATTCGAAAGT-T 941785 Query 63741 TACTTG-AAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCC 63799 | |||| ||| |||||| | | | |||||| | || || ||| | | ||||||| Sbjct 941786 TCCTTGCTAATCATAGGAGATGCTGTGCCATTTCTTGGGTTTGTATATTGGTATAAATCG 941845 Query 63800 TCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTA 63859 || || | || ||||||| |||| |||||| || || || || || || | | Sbjct 941846 CGAATAACGTGCGAGAACTGTTTTTTGGTTTGTTTGTGAAGGTTGGAGACTGCAATACGA 941905 Query 63860 GCGGCTAGAATGGCATAATCCGGATG 63885 || ||||||||||||||||| ||||| Sbjct 941906 GCAGCTAGAATGGCATAATCGGGATG 941931 >seq7 Length=2023280 Score = 154 bits (170), Expect = 2e-32 Identities = 573/904 (63%), Gaps = 67/904 (7%) Strand=Plus/Minus Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429 |||||||| ||||| || | ||||||||||| ||||| || || | || || ||||| Sbjct 1768570 TTTTGGTAATCACCAACTCTCTTTTCGAAAAAGTTAGTCTTGCCGGCCAAGGAAATATTC 1768511 Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 32489 |||||||| || |||||||||| | || || | ||| | ||||| | | Sbjct 1768510 TCCATGAAGTCAAATGGATTGGCAGATTTGTAGACTTTGTCGTTGCCCAAAGCGATGAGG 1768451 Query 32490 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 32549 | | ||| || || ||||| || || ||||| | | ||||| |||| ||| Sbjct 1768450 AGACGATCAGCAACGAATTCGATGTACTGCTTCATGAGGGTGGAGTTCATGCCTAGAAGA 1768391 Query 32550 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 32609 | ||||||||| | || | |||||||| || || | ||| || || || || | Sbjct 1768390 GCACAAGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTGCGACGGCCTCGGTGATGACG 1768331 Query 32610 GATCTT--ACTGTTT-CTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCG 32666 |||| || | || ||| | || || | | | ||| || | | |||||| Sbjct 1768330 --TCTTGGACAGCTTGCTTGGATGGGCGG-TGCTTGAGATGGGAGAAGAGGAGGCATGCG 1768274 Query 32667 AAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGC 32726 |||||| ||| ||||| ||||| | || | |||||| ||||| |||||||||| | Sbjct 1768273 AAATCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTTGAAAAGGTGAGTCCGGCC 1768214 Query 32727 ATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCT 32786 || || |||||||| || ||||| || || || || || ||||| || || || || ||| Sbjct 1768213 ATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAAAAGATACCT 1768154 Query 32787 TCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG---CTGTCATGTATCCAC 32843 || || || || || || | ||| | | || | || | | || || ||||| Sbjct 1768153 TCAACGGCAGCGAATGCGACAAGACGTTGAGCAAAGGTGGAGTTCTTATCTTGAATCCAT 1768094 Query 32844 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA----------------------- 32880 || |||||| ||||||||||| || | ||||| | Sbjct 1768093 TTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGAACTATCAAGCTTGTTAGTTGAATT 1768034 Query 32881 ----------------------------TTGTCTCTATAGCATTAAAGAGATA-Gt-ttt 32910 | || || |||||||| ||||| || || ||| Sbjct 1768033 CACGTAACAATATATGATTATCACCTACTGGTATCAATAGCATTGAAGAGGTATGTCTTT 1767974 Query 32911 tttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGT 32970 | | || | || || | |||||| || || | |||| || |||| || ||||||| Sbjct 1767973 TGTGCTTGC--TCCTTGATATATGTGTCGATGAGAAGAGAGTATGTTTCGGAGTGAATGT 1767916 Query 32971 TTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTAC 33030 | || || ||||| || ||||||||||||| ||||| | || || ||||| || Sbjct 1767915 TCTCCATCATGATTTGGAAACCGTAGAAGCATCGTGCCTCTGGGATTTGAACTTCACCAC 1767856 Query 33031 AAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATA 33090 ||||| || | || || || || || |||||||| || || || || || | | Sbjct 1767855 TGAATCGCTCAACCAAGTTCTCGTTGACAATTCCGTCTGATGCGGCGAAGAATGCGAGAA 1767796 Query 33091 CATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATTGATATCTT 33147 | || || || || ||||| | ||| || ||||| || | || ||| | Sbjct 1767795 CGTGGGAGATGAAGTAACGCTCGTCATCATTGAGTCTGTTGTTCCAGTCGTGGAGATCCT 1767736 Query 33148 TAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCC 33207 | || | ||| | ||||| | ||||| || ||||||||||||||||| ||||| | || Sbjct 1767735 TTGACAAATCAATCTCTTCTGCGGTCCAGAAAGATGCCTCTGCCTTTTTGTACATCTGCC 1767676 Query 33208 AGAT 33211 |||| Sbjct 1767675 AGAT 1767672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633629069452000