Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq15 122 8e-23 seq1 111 1e-19 >seq15 Length=1659866 Score = 122 bits (134), Expect = 8e-23 Identities = 157/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || ||| ||||||| |||| || ||||| || Sbjct 675466 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCC 675525 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| || || ||| || ||| ||||| || || |||||||| |||| Sbjct 675526 GACACCATCGA--CAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCACCCGACC 675583 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| | || || ||||| || ||| | ||||||| |||||| | |||||||| Sbjct 675584 AACAGCGATTGATCTTCGCCGGAAAGCAACTCGAAGATGGTCGCACCCTTTCCGATTACA 675643 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 | || ||||| || || || || || || ||| || Sbjct 675644 ACATCCAAAAGGAGTCTACTCTTCACTTGGTGTTA 675678 >seq1 Length=3544467 Score = 111 bits (122), Expect = 1e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 25005 ATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACT 25064 ||| | || |||||| | ||||| || ||||||| | || || || || || ||||| Sbjct 2378308 ATAGTCGTTAAGACTCTTACCGGAAAGACCATCACCCTTGAGGTCGAATCTTCAGACACC 2378249 Query 25065 ATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCG 25123 ||||| | ||| | || | ||| ||||| ||||| ||||| || ||||||||||| Sbjct 2378248 ATCGACAACGTTAAGTCTAAGATTCAA-GACAAGGAAGGCATTCCTCCCGACCAACAGCG 2378190 Query 25124 GATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCA 25183 | ||||| ||||| || ||| | ||||||| |||||| | |||||| ||||| || Sbjct 2378189 TTTGATTTTCGCCGGAAAGCAACTGGAAGATGGTCGCACCCTTTCCGATTATAATATCCA 2378130 Query 25184 AAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 ||||| || || || || || || || || || Sbjct 2378129 GAAAGAGTCTACCCTTCACTTGGTCCTCAGACT 2378097 Score = 102 bits (112), Expect = 7e-17 Identities = 153/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| ||||| || || | || ||| | |||||||| ||||| Sbjct 2377858 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACAATTACATTAGAAGTGGAATCGTCA 2377799 Query 25059 GACACTATCGAGTCAC--TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || || || || | | | || |||| | ||| ||||| || || ||||||||||| | Sbjct 2377798 GATACCATTGA-TAATGTTAAATCAAAGATTCAG-GACAAGGAGGGCATTCCACCTGATC 2377741 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| || | || ||||| || || || || || || | | || | ||||||| Sbjct 2377740 AACAACGATTGATCTTTGCAGGAAAGCAGTTGGAGGACGGCAGAACCCTTTCGGATTACA 2377681 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||||| ||| ||| | || || ||||| Sbjct 2377680 ATATTCAAAAGGAAAGCACCTTGCACTTGGTGCT 2377647 Score = 102 bits (112), Expect = 7e-17 Identities = 140/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 25021 TGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGC 25080 |||||||||| |||| || |||| || ||||| ||||| ||||| | ||| Sbjct 2378574 TGACCGGTAAGACCATTACCCTCGAGGTTGAGTCCAGCGACACCATCGACAACGTCAAGT 2378515 Query 25081 AAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCA 25140 || ||| ||||| || || ||||| || ||||||||||| | || || ||||| | Sbjct 2378514 CCAAGATCCAGGACAAGGAGGGAATTCCTCCCGACCAACAGCGTTTGATCTTCGCCGGAA 2378455 Query 25141 AACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTAC 25200 ||||| | ||||||| |||||| || | || ||||| || || || || ||||| || | Sbjct 2378454 AACAACTTGAAGATGGTCGCACCTTGAGTGACTACAACATCCAGAAGGAGTCCACTCTCC 2378395 Query 25201 ATTTAGTGCTAAGGCT 25216 | || || || || || Sbjct 2378394 ACTTGGTCCTCAGACT 2378379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433326045961550