Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq7 122 1e-22 >seq7 Length=2023280 Score = 122 bits (134), Expect = 1e-22 Identities = 267/391 (68%), Gaps = 8/391 (2%) Strand=Plus/Minus Query 92926 ATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTAC 92985 |||||| || ||||| |||||||| ||| | | ||||| ||||||||| | || Sbjct 1768445 ATCAGCAACGAATTCGATGTACTGCTTCATGAGGGTGGAGTTCATGCCTAGAAGA-GCAC 1768387 Query 92986 A-GGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTA 93044 | || ||||| ||||||||||| |||| ||||||| | ||||| || | | || ||| Sbjct 1768386 AAGGAAGAGCCTCGGTCAAGAATTCTTGCTCGATTGCGACGGCCTCGGTGATGACGTCTT 1768327 Query 93045 TTACT-CTACTATTTGG-TGGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGTC 93102 || || | |||| ||| || || || | | | | ||| || || || Sbjct 1768326 GGACAGCT--TGCTTGGATGGGCGGTGCTTGAGATGGGAGAAGAGGAGGCATGCGAAATC 1768269 Query 93103 GGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAG 93162 ||| || | ||||||||| || || || | || || || || | || | | || Sbjct 1768268 GGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTTGAAAAGGTGAGTCCGGCCATGAG 1768209 Query 93163 TCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCAC 93222 || || ||||||||||| || || || || || || || ||||| |||||||| || Sbjct 1768208 ACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAAAAGATACCTTCAAC 1768149 Query 93223 GGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTG-ATCCATTTTA 93281 ||| || ||||| |||| ||||| ||||| | | | ||| | || |||||||| | Sbjct 1768148 GGCAGCGAATGCGACAAGACGTTGAGCAAAGGTGGAGTTCTTA-TCTTGAATCCATTTGA 1768090 Query 93282 AAGCCCAATCGGCTTTTTTCTTAATACAAGG 93312 |||||| ||||| || ||||| || ||||| Sbjct 1768089 CAGCCCAGTCGGCCTTCTTCTTGATGCAAGG 1768059 Score = 109 bits (120), Expect = 6e-19 Identities = 213/312 (68%), Gaps = 6/312 (2%) Strand=Plus/Minus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 || ||||| ||||| | ||||| || |||| || || | |||||||| |||||| Sbjct 1767958 ATATATGTGTCGATGAGAAGAGAGTATGTTTCGGAGTGAATGTTCTCCATCATGATTTGG 1767899 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481 || |||||||| |||| || || | ||| || ||||| | |||| ||| || | Sbjct 1767898 AAACCGTAGAAGCATCGTGCCTCTGGGATTTGAACTTCACCACTGAATCGCTCAACCAAG 1767839 Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541 || || ||||| || || || ||||| || || || || | | || || || | Sbjct 1767838 TTCTCGTTGACAATTCCGTCTGATGCGGCGAAGAATGCGAGAACGTGGGAGATGAAGTAA 1767779 Query 93542 TTCTCATCATCTTTAAGC---TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCT 93598 ||| ||||| || || || | ||| ||| ||||| ||||| | ||| | ||| Sbjct 1767778 CGCTCGTCATCATTGAGTCTGTTGTTCCAGTCGTGGAGATCCTTTGACAAATCAATCTCT 1767719 Query 93599 TCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCC--ATATGTCTTGATA-T 93655 || | ||||| || ||||| ||||| ||||||||||| | || || ||| |||| | Sbjct 1767718 TCTGCGGTCCAGAAAGATGCCTCTGCCTTTTTGTACATCTGCCAGATCTGTTTTGAAAGA 1767659 Query 93656 TGAATTGGAAAT 93667 |||||| | ||| Sbjct 1767658 TGAATTAGCAAT 1767647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556858224518800