Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017-
05-31] 370 sequences; 44,096,448 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq1 118 9e-22
seq15 113 4e-20
seq12 84.2 2e-11
>seq1
Length=3544467
Score = 118 bits (130), Expect = 9e-22
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| ||||| | || || || | ||||| ||||| || || || ||||||
Sbjct 2378085 ATACCACCACGAAGTCTGAGGACCAAGTGAAGGGTAGACTCTTTCTGGATATTATAATCG 2378144
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || ||| |||||| ||||| || || ||| | || | |||||||||||| |||
Sbjct 2378145 GAAAGGGTGCGACCATCTTCCAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGA 2378204
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||| ||||| |||||| || | | || | |||||| | ||||||
Sbjct 2378205 GGAATGCCTTCCTTGTCTTGAATCTTAGACTTAACGTTGTCGATGGTGTCTGAAGATTCG 2378264
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370
|| || | ||| | || || ||||| ||||| || ||
Sbjct 2378265 ACCTCAAGGGTGATGGTCTTTCCGGTAAGAGTCTTAAC 2378302
Score = 118 bits (130), Expect = 9e-22
Identities = 151/208 (73%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| ||||| | || || || | || || || || || |||||||| ||
Sbjct 2378367 ATACCACCACGAAGTCTGAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCA 2378426
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|||| || ||| ||||||||||||||| || ||| |||| | |||||||||||| |||
Sbjct 2378427 CTCAAGGTGCGACCATCTTCAAGTTGTTTTCCGGCGAAGATCAAACGCTGTTGGTCGGGA 2378486
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| || || ||||| ||||| || | | || | ||||||| |||| ||
Sbjct 2378487 GGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTGGACTCA 2378546
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCA 114360
|| || | ||| | || || |||||||
Sbjct 2378547 ACCTCGAGGGTAATGGTCTTACCGGTCA 2378574
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || ||||||| || ||||| |||||||||||||||||
Sbjct 2377857 ATACCACCACGGAGACGAAGGACCAAATGTAAAGTCGATTCCTTTTGAATGTTGTAATCC 2377916
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| |||||| || |||||||| |||||||| |||| ||||| ||||| || ||
Sbjct 2377917 GAAAGTGTACGACCGTCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGT 2377976
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || || || || ||||| || | | || | ||| || | |||||
Sbjct 2377977 GGGATACCCTCCTTATCTTGGATCTTCGACTTCACATTGTCGATGGTATCCGATGATTCA 2378036
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || || ||||| || || || || |||||||||||
Sbjct 2378037 ACCTCCAAAGTGATTGTCTTTCCGGTAAGGGTCTTGACGAAAATCTGCAT 2378086
>seq15
Length=1659866
Score = 113 bits (124), Expect = 4e-20
Identities = 164/232 (71%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| ||||| || | || || || || | ||||| || ||||| ||||||||||||
Sbjct 675693 ACCACCACGGAGACGTAACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGA 675634
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
| || ||| |||||| ||||| || || ||| |||| | ||||||||||| || ||
Sbjct 675633 AAGGGTGCGACCATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGG 675574
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
||| || || ||||| ||||| || | | || | |||||||| || || ||
Sbjct 675573 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAAC 675514
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386
|| | ||| | |||||||| || || || || || || ||||||||| ||
Sbjct 675513 CTCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGACT 675462
>seq12
Length=1765576
Score = 84.2 bits (92), Expect = 2e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254
||||| ||||||||||| | |||||| ||||| | ||| || |||||| ||||
Sbjct 99194 TTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCTTCCAATTGCTTTCCAGCGAAGATC 99135
Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314
| ||| ||||| || |||||||| || || ||||| ||||| || | | ||
Sbjct 99134 AAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 99075
Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 114373
| |||||||| ||| ||||| || | ||| | || ||||| || || || || || ||
Sbjct 99074 ATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 99016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420132505456440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |