Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1 118 9e-22 seq15 113 4e-20 seq12 84.2 2e-11 >seq1 Length=3544467 Score = 118 bits (130), Expect = 9e-22 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| ||||| | || || || | ||||| ||||| || || || |||||| Sbjct 2378085 ATACCACCACGAAGTCTGAGGACCAAGTGAAGGGTAGACTCTTTCTGGATATTATAATCG 2378144 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || ||| |||||| ||||| || || ||| | || | |||||||||||| ||| Sbjct 2378145 GAAAGGGTGCGACCATCTTCCAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGA 2378204 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| |||||| || | | || | |||||| | |||||| Sbjct 2378205 GGAATGCCTTCCTTGTCTTGAATCTTAGACTTAACGTTGTCGATGGTGTCTGAAGATTCG 2378264 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370 || || | ||| | || || ||||| ||||| || || Sbjct 2378265 ACCTCAAGGGTGATGGTCTTTCCGGTAAGAGTCTTAAC 2378302 Score = 118 bits (130), Expect = 9e-22 Identities = 151/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| ||||| | || || || | || || || || || |||||||| || Sbjct 2378367 ATACCACCACGAAGTCTGAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCA 2378426 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| || ||| ||||||||||||||| || ||| |||| | |||||||||||| ||| Sbjct 2378427 CTCAAGGTGCGACCATCTTCAAGTTGTTTTCCGGCGAAGATCAAACGCTGTTGGTCGGGA 2378486 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || ||||| ||||| || | | || | ||||||| |||| || Sbjct 2378487 GGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTGGACTCA 2378546 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCA 114360 || || | ||| | || || ||||||| Sbjct 2378547 ACCTCGAGGGTAATGGTCTTACCGGTCA 2378574 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || ||||||| || ||||| ||||||||||||||||| Sbjct 2377857 ATACCACCACGGAGACGAAGGACCAAATGTAAAGTCGATTCCTTTTGAATGTTGTAATCC 2377916 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | |||||| || |||||||| |||||||| |||| ||||| ||||| || || Sbjct 2377917 GAAAGTGTACGACCGTCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGT 2377976 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || || || ||||| || | | || | ||| || | ||||| Sbjct 2377977 GGGATACCCTCCTTATCTTGGATCTTCGACTTCACATTGTCGATGGTATCCGATGATTCA 2378036 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || ||||| || || || || ||||||||||| Sbjct 2378037 ACCTCCAAAGTGATTGTCTTTCCGGTAAGGGTCTTGACGAAAATCTGCAT 2378086 >seq15 Length=1659866 Score = 113 bits (124), Expect = 4e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | || || || || | ||||| || ||||| |||||||||||| Sbjct 675693 ACCACCACGGAGACGTAACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGA 675634 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | || ||| |||||| ||||| || || ||| |||| | ||||||||||| || || Sbjct 675633 AAGGGTGCGACCATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGG 675574 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| || || ||||| ||||| || | | || | |||||||| || || || Sbjct 675573 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAAC 675514 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386 || | ||| | |||||||| || || || || || || ||||||||| || Sbjct 675513 CTCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGACT 675462 >seq12 Length=1765576 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254 ||||| ||||||||||| | |||||| ||||| | ||| || |||||| |||| Sbjct 99194 TTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCTTCCAATTGCTTTCCAGCGAAGATC 99135 Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314 | ||| ||||| || |||||||| || || ||||| ||||| || | | || Sbjct 99134 AAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 99075 Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 114373 | |||||||| ||| ||||| || | ||| | || ||||| || || || || || || Sbjct 99074 ATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 99016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420132505456440