Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq7 212 1e-49 seq4 136 7e-27 >seq7 Length=2023280 Score = 212 bits (234), Expect = 1e-49 Identities = 361/515 (70%), Gaps = 9/515 (2%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGAT-CGAGAGTCCCGACGCAAC 42691 || ||||||||||||||||| |||||||| |||| ||||| | ||| | || | || Sbjct 1768059 CCTTGCATCAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGA-TAAGAACTCCAC 1768117 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 || | | | || || || || | ||||| || || ||||| ||||| || |||| Sbjct 1768118 CTTTGCTCAACGTCTTGTCGCATTCGCTGCCGTTGAAGGTATCTTTTTCTCCGGATCCTT 1768177 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810 |||||| ||||||||||||||| || ||| || ||| ||||||||||||| || |||| Sbjct 1768178 CGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTC-ATGGCCGGACTCACCTTTTCAAACG 1768236 Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870 |||||||| | | ||||| || || || | || || || |||||||| ||||| || Sbjct 1768237 AACTCATCTCCCGTGACGAAGGTCTCCACACCGATTTCGCATGCCTCCTCTTCTC---CC 1768293 Query 42871 ACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGA 42930 | |||| |||| || || ||| | |||| | | ||||||| |||||||| | | Sbjct 1768294 ATCTCAAGCACCGCCCATCCAAGCAAGCTGTCCAAGACGTCATCACCGAGGCCGTCGCAA 1768353 Query 42931 TCGAGAAGGAGTTCCTCACGCAGTCGCTGCC-CGTGTCCCTGGTCGGCATGAACCACGAC 42989 ||||| | || ||| | || || | || || ||| | || | ||||||||| | | Sbjct 1768354 TCGAGCAAGAATTCTTGACCGAGGCTCTTCCTTGTG-CTCTTCTAGGCATGAACTCCACC 1768412 Query 42990 CTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGC 43049 |||||| |||||||| | | ||| || || | |||||| | |||| | | Sbjct 1768413 CTCATGAAGCAGTACATCGAATTCGTTGCTGATCGTCTCCTCATCGCTTTGGGCAACGAC 1768472 Query 43050 CGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAG 43109 ||||||| | | || || ||||| |||||||| || || |||| |||||| Sbjct 1768473 AAAGTCTACAAATCTGCCAATCCATTTGACTTCATGGAGAATATTTCCTTGGCCGGCAAG 1768532 Query 43110 ACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144 || ||||||||||| ||| | || | || ||||| Sbjct 1768533 ACTAACTTTTTCGAAAAGAGAGTTGGTGATTACCA 1768567 >seq4 Length=2560074 Score = 136 bits (150), Expect = 7e-27 Identities = 426/648 (66%), Gaps = 19/648 (3%) Strand=Plus/Plus Query 244760 ATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAG 244819 || || ||||||| || || ||| ||| |||||| || |||||||| |||||||| Sbjct 940874 ATAGTACCCAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCCTTGTAAAGCATGAAA 940933 Query 244820 GGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACC 244879 || ||||||||| || || | || | | || ||| || | |||||||| Sbjct 940934 GGATTTCCGGTCTCGGTTTGAGCCTCAAGAATGGAGTACCAAAGTTTTTGAGCCTTGATA 940993 Query 244880 GTCCTGCGAGCCTTGCCCTCTGCCT---CGTAGCGGGTGTACAGGGCCTCGAACTCGGGG 244936 ||| ||||| ||||||| ||||| |||| | ||| || ||||||||||| | Sbjct 940994 GTCTTGCGACCCTTGCC---TGCCTTTTCGTAACCCTCGTAGAGAGCCTCGAACTCCTCG 941050 Query 244937 CCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACATGAGACTCCACTCGCCGC 244994 || | || || ||| || || || || | |||||||||||| |||| || || Sbjct 941051 CCATAAACATCTGCTAAACCTGGACATTCGTTG--GGGCACATGAGAGTCCAATCTCCAT 941108 Query 244995 CGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGG 245054 | | || | || |||||| || || || ||||| | ||| | |||||| || | | Sbjct 941109 TCTTTTCAACACGCTTCATGAATAGATCAGGAATCCACAAGGCGTAGAAGAGATCGCGTG 941168 Query 245055 TCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGT 245114 | || ||| |||| || || | || || | || ||||| || || | | Sbjct 941169 CACGAACTTCTTCCTTGCCATGATTTTTGCGTAGATCAAGGAACTCAAAAACATCCGCAT 941228 Query 245115 GCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCA 245174 |||| ||||| | ||| ||||| | ||| || || ||||| || || || || | || || Sbjct 941229 GCCATGGCTCAAGGTAAACAGCAAAGGCACCAGGACGCTTATTACCACCTTGAT-CAACA 941287 Query 245175 TCCTCTCG-AGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTT 245232 | ||| | || | |||||| | || || |||| || ||||||||||||| || || Sbjct 941288 T-ATCTGGCAGTGTTGTTGAAAACTCGGAGCATAGGAACGATGCCGTTAGAGTTTCCATT 941346 Query 245233 GGTGCCCTTGATGTAGGCGCCCTTGCCCCTGA--GGTTGCTGATGGACATGCCTAGTCCG 245290 ||| || ||||| ||||| | | | || | || || || | || | || Sbjct 941347 GGTACCGGCTATGTATGCGCCAGTAGCACGGATTCGGTGAATATTGAGA--CCAATACCA 941404 Query 245291 CCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTG 245350 || || | ||| ||||| | || || |||| | || || || || || || ||| Sbjct 941405 CCAGCATTCTTTGAGATCATAGCACAAATCTTCAAAGTATCGTAAATACCATCAATACTG 941464 Query 245351 TCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGG 245398 ||| |||||||| || || ||||| || || || | | ||||| || Sbjct 941465 TCCTCCTTCATGTCGATAAGGAAGCATGATGAAAG-TTGTGCTTGTGG 941511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944334832431200