Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017-
05-31] 370 sequences; 44,096,448 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq7 212 1e-49
seq4 136 7e-27
>seq7
Length=2023280
Score = 212 bits (234), Expect = 1e-49
Identities = 361/515 (70%), Gaps = 9/515 (2%)
Strand=Plus/Plus
Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGAT-CGAGAGTCCCGACGCAAC 42691
|| ||||||||||||||||| |||||||| |||| ||||| | ||| | || | ||
Sbjct 1768059 CCTTGCATCAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGA-TAAGAACTCCAC 1768117
Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751
|| | | | || || || || | ||||| || || ||||| ||||| || ||||
Sbjct 1768118 CTTTGCTCAACGTCTTGTCGCATTCGCTGCCGTTGAAGGTATCTTTTTCTCCGGATCCTT 1768177
Query 42752 CGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810
|||||| ||||||||||||||| || ||| || ||| ||||||||||||| || ||||
Sbjct 1768178 CGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTC-ATGGCCGGACTCACCTTTTCAAACG 1768236
Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870
|||||||| | | ||||| || || || | || || || |||||||| ||||| ||
Sbjct 1768237 AACTCATCTCCCGTGACGAAGGTCTCCACACCGATTTCGCATGCCTCCTCTTCTC---CC 1768293
Query 42871 ACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGA 42930
| |||| |||| || || ||| | |||| | | ||||||| |||||||| | |
Sbjct 1768294 ATCTCAAGCACCGCCCATCCAAGCAAGCTGTCCAAGACGTCATCACCGAGGCCGTCGCAA 1768353
Query 42931 TCGAGAAGGAGTTCCTCACGCAGTCGCTGCC-CGTGTCCCTGGTCGGCATGAACCACGAC 42989
||||| | || ||| | || || | || || ||| | || | ||||||||| | |
Sbjct 1768354 TCGAGCAAGAATTCTTGACCGAGGCTCTTCCTTGTG-CTCTTCTAGGCATGAACTCCACC 1768412
Query 42990 CTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGC 43049
|||||| |||||||| | | ||| || || | |||||| | |||| | |
Sbjct 1768413 CTCATGAAGCAGTACATCGAATTCGTTGCTGATCGTCTCCTCATCGCTTTGGGCAACGAC 1768472
Query 43050 CGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAG 43109
||||||| | | || || ||||| |||||||| || || |||| ||||||
Sbjct 1768473 AAAGTCTACAAATCTGCCAATCCATTTGACTTCATGGAGAATATTTCCTTGGCCGGCAAG 1768532
Query 43110 ACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144
|| ||||||||||| ||| | || | || |||||
Sbjct 1768533 ACTAACTTTTTCGAAAAGAGAGTTGGTGATTACCA 1768567
>seq4
Length=2560074
Score = 136 bits (150), Expect = 7e-27
Identities = 426/648 (66%), Gaps = 19/648 (3%)
Strand=Plus/Plus
Query 244760 ATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAG 244819
|| || ||||||| || || ||| ||| |||||| || |||||||| ||||||||
Sbjct 940874 ATAGTACCCAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCCTTGTAAAGCATGAAA 940933
Query 244820 GGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACC 244879
|| ||||||||| || || | || | | || ||| || | ||||||||
Sbjct 940934 GGATTTCCGGTCTCGGTTTGAGCCTCAAGAATGGAGTACCAAAGTTTTTGAGCCTTGATA 940993
Query 244880 GTCCTGCGAGCCTTGCCCTCTGCCT---CGTAGCGGGTGTACAGGGCCTCGAACTCGGGG 244936
||| ||||| ||||||| ||||| |||| | ||| || ||||||||||| |
Sbjct 940994 GTCTTGCGACCCTTGCC---TGCCTTTTCGTAACCCTCGTAGAGAGCCTCGAACTCCTCG 941050
Query 244937 CCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACATGAGACTCCACTCGCCGC 244994
|| | || || ||| || || || || | |||||||||||| |||| || ||
Sbjct 941051 CCATAAACATCTGCTAAACCTGGACATTCGTTG--GGGCACATGAGAGTCCAATCTCCAT 941108
Query 244995 CGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGG 245054
| | || | || |||||| || || || ||||| | ||| | |||||| || | |
Sbjct 941109 TCTTTTCAACACGCTTCATGAATAGATCAGGAATCCACAAGGCGTAGAAGAGATCGCGTG 941168
Query 245055 TCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGT 245114
| || ||| |||| || || | || || | || ||||| || || | |
Sbjct 941169 CACGAACTTCTTCCTTGCCATGATTTTTGCGTAGATCAAGGAACTCAAAAACATCCGCAT 941228
Query 245115 GCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCA 245174
|||| ||||| | ||| ||||| | ||| || || ||||| || || || || | || ||
Sbjct 941229 GCCATGGCTCAAGGTAAACAGCAAAGGCACCAGGACGCTTATTACCACCTTGAT-CAACA 941287
Query 245175 TCCTCTCG-AGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTT 245232
| ||| | || | |||||| | || || |||| || ||||||||||||| || ||
Sbjct 941288 T-ATCTGGCAGTGTTGTTGAAAACTCGGAGCATAGGAACGATGCCGTTAGAGTTTCCATT 941346
Query 245233 GGTGCCCTTGATGTAGGCGCCCTTGCCCCTGA--GGTTGCTGATGGACATGCCTAGTCCG 245290
||| || ||||| ||||| | | | || | || || || | || | ||
Sbjct 941347 GGTACCGGCTATGTATGCGCCAGTAGCACGGATTCGGTGAATATTGAGA--CCAATACCA 941404
Query 245291 CCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTG 245350
|| || | ||| ||||| | || || |||| | || || || || || || |||
Sbjct 941405 CCAGCATTCTTTGAGATCATAGCACAAATCTTCAAAGTATCGTAAATACCATCAATACTG 941464
Query 245351 TCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGG 245398
||| |||||||| || || ||||| || || || | | ||||| ||
Sbjct 941465 TCCTCCTTCATGTCGATAAGGAAGCATGATGAAAG-TTGTGCTTGTGG 941511
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944334832431200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |