Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1 125 2e-23 seq15 120 7e-22 seq12 116 9e-21 seq7 87.8 4e-12 >seq1 Length=3544467 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | ||| | || ||| ||||| || || || || | Sbjct 2377860 CCACCACGGAGACGAAGGACCAAATGTAAAGTCGATTCCTTTTGAATGTTGTAATCCGAA 2377919 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | ||| || || || ||||| ||||| |||||| |||| Sbjct 2377920 AGTGTACGACCGTCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTGGG 2377979 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || ||||| ||||| |||| ||||| || || || | ||| ||||| || Sbjct 2377980 ATACCCTCCTTATCTTGGATCTTCGACTTCACATTGTCGATGGTATCCGATGATTCAACC 2378039 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 2378040 TCCAAAGTGATTGTCTTTCCGGTAAGGGTCTTGACGAAAATCTGCAT 2378086 Score = 120 bits (132), Expect = 7e-22 Identities = 159/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| || || | |||| || ||||| ||||||||||| |||| Sbjct 2378088 CCACCACGAAGTCTGAGGACCAAGTGAAGGGTAGACTCTTTCTGGATATTATAATCGGAA 2378147 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | ||| ||||| ||||| |||| ||||||||| || Sbjct 2378148 AGGGTGCGACCATCTTCCAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGAGGA 2378207 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || || || || || | || ||||| || || | || ||||| || Sbjct 2378208 ATGCCTTCCTTGTCTTGAATCTTAGACTTAACGTTGTCGATGGTGTCTGAAGATTCGACC 2378267 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATAT 288467 || || ||||| ||||| ||||| |||||||| |||| ||| Sbjct 2378268 TCAAGGGTGATGGTCTTTCCGGTAAGAGTCTTAACGACTAT 2378308 >seq15 Length=1659866 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || || |||| || ||||| || ||||| | ||| ||||| |||||| Sbjct 675656 TCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACCATCTTCGAGTTGCTTTCCGGCGAAG 675597 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| |||||||| ||| ||||| || || |||||||| || | || || || Sbjct 675596 ATCAATCGCTGTTGGTCGGGTGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 675537 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| || || || ||||| ||||| || || || || || ||||||||| Sbjct 675536 TCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACG 675477 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 675476 AAGATCTGCAT 675466 >seq12 Length=1765576 Score = 116 bits (128), Expect = 9e-21 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 |||||||| || || || | ||| || ||||||||||| ||||| ||||| ||||||||| Sbjct 99194 TTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCTTCCAATTGCTTTCCAGCGAAGATC 99135 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 | ||| |||||| || ||||| || || |||||||| || | || || || || Sbjct 99134 AAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 99075 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | ||| || || || || || ||||| ||||| || || || ||||||||||| Sbjct 99074 ATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 99016 >seq7 Length=2023280 Score = 87.8 bits (96), Expect = 4e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 269108 CAAACGAAAAAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCG 269167 ||| ||| |||| ||| | || ||| | || ||| || | | || ||||| || Sbjct 1768351 CAATCGAGCAAGAATTCTTGACCGAGGCTCTTCCTTGTGCTCTTCTAGGCATGAACTCCA 1768410 Query 269168 ATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATG 269227 |||||||| || || ||||||||||| ||||||||| || ||| || | || | | Sbjct 1768411 CCCTCATGAAGCAGTACATCGAATTCGTTGCTGATCGTCTCCTCATCGCTTTGGGCAACG 1768470 Query 269228 AGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAA 269287 | ||||| ||||| || ||||| || | ||| ||||| ||||| | | || | Sbjct 1768471 ACAAAGTCTACAAATCTGCCAATCCATTTGACTTCATGGAGAATATTTCCTTGGCCGGCA 1768530 Query 269288 AGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCAA 269325 |||| ||||| ||||||||| | || | || || ||| Sbjct 1768531 AGACTAACTTTTTCGAAAAGAGAGTTGGTGATTACCAA 1768568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179648807700860